<i>IRF2BP2::JAK2</i> Defines a Novel Kinase‐Activating Fusion in Pediatric T‐Cell Acute Lymphoblastic Leukemia

T-cell acute lymphoblastic leukemia (T-ALL) is a biologically heterogeneous and clinically aggressive malignancy, where outcomes remain poor for patients with early relapse or refractory disease. Although tyrosine kinase alterations represent potentially actionable lesions, understanding of their functional and therapeutic relevance in T-ALL is limited. Here, we report the first case of an IRF2BP2::JAK2 fusion in a pediatric patient with high-risk T-ALL, identified through whole-genome and transcriptome sequencing. Using CRISPR-Cas9 genome engineering, we modeled the Irf2bp2::Jak2 fusion in Ba/F3 cells and showed that it confers cytokine-independent growth, localizes to the cytoplasm, and drives constitutive JAK-STAT signaling. Importantly, both type I (ruxolitinib) and type II (CHZ868) JAK inhibitors potently inhibited the fusion. These findings establish IRF2BP2::JAK2 as a novel oncogenic driver and druggable vulnerability in T-ALL and represent the first reported instance of an IRF2BP2 fusion directly activating a non-receptor tyrosine kinase. More broadly, this work underscores the critical role of functional modeling in defining the biological and therapeutic significance of rare genomic alterations to enable the translation of precision medicine to the clinic.

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Publication Details

Journal
Genes Chromosomes and Cancer
Published
2026-02-01
DOI
https://doi.org/10.1002/gcc.70112
Primary Topic
Acute Lymphoblastic Leukemia research
Type
article
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article

IRF2BP2::JAK2 Defines a Novel Kinase‐Activating Fusion in Pediatric T‐Cell Acute Lymphoblastic Leukemia

Fatimah Jalud, Hansen J. Kosasih, Charles E. de Bock, Michael Lee et al.
Genes Chromosomes and Cancer
Acute Lymphoblastic Leukemia research
article

IRF2BP2::JAK2 Defines a Novel Kinase‐Activating Fusion in Pediatric T‐Cell Acute Lymphoblastic Leukemia

Fatimah Jalud, Hansen J. Kosasih, Charles E. de Bock, Michael Lee, Teresa Sadras, Chelsea Mayoh, Bhavna Padhye, Diane T. Hanna, Paul G. Ekert, Danièl Thomas, Tasnia Ibnat, Kaitlyn Kew, Kimberly Dias, Lauren Brown
article en

Abstract

T-cell acute lymphoblastic leukemia (T-ALL) is a biologically heterogeneous and clinically aggressive malignancy, where outcomes remain poor for patients with early relapse or refractory disease. Although tyrosine kinase alterations represent potentially actionable lesions, understanding of their functional and therapeutic relevance in T-ALL is limited. Here, we report the first case of an IRF2BP2::JAK2 fusion in a pediatric patient with high-risk T-ALL, identified through whole-genome and transcriptome sequencing. Using CRISPR-Cas9 genome engineering, we modeled the Irf2bp2::Jak2 fusion in Ba/F3 cells and showed that it confers cytokine-independent growth, localizes to the cytoplasm, and drives constitutive JAK-STAT signaling. Importantly, both type I (ruxolitinib) and type II (CHZ868) JAK inhibitors potently inhibited the fusion. These findings establish IRF2BP2::JAK2 as a novel oncogenic driver and druggable vulnerability in T-ALL and represent the first reported instance of an IRF2BP2 fusion directly activating a non-receptor tyrosine kinase. More broadly, this work underscores the critical role of functional modeling in defining the biological and therapeutic significance of rare genomic alterations to enable the translation of precision medicine to the clinic.

Genes Chromosomes and CancerVol. 65(2)
Royal Children's Hospital (AU), The University of Melbourne (AU), La Trobe University (AU), Peter MacCallum Cancer Centre (AU), Cancer Institute of New South Wales (AU), Children's Hospital at Westmead (AU), UNSW Sydney (AU), South Australian Health and Medical Research Institute (AU), Murdoch Children's Research Institute (AU), Olivia Newton-John Cancer Wellness & Research Centre (AU)
No poverty
Openalex Percentile: Top 53%
Acute Lymphoblastic Leukemia research
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