Predicting groundwater storage from seasonal managed aquifer recharge: insights from machine learning and explainable AI techniques

Managed Aquifer Recharge (MAR) is widely used to enhance groundwater storage and support sustainable water use. To support site selection and planning, Machine Learning (ML) models are increasingly used as computationally efficient surrogates for traditional numerical models. While ML has shown promise for steady-state simulations, capturing transient responses remains a challenge, yet these are essential for understanding how recharged water is retained through dry periods. In this study, we use ML to model transient MAR effects by decomposing the groundwater storage time series after recharge ceases into two components: the MAR-response and a decay coefficient, assuming exponential storage decline. This simplified representation captures long-term storage dynamics, with U-Net and XGBoost accurately predict these components (R<sup>2</sup> > 0.82) for the Baakse Beek catchment in the sandy, drought-sensitive soils of the Netherlands. The trained models are computationally efficient, making large-scale scenario testing and optimization feasible. Explainable AI techniques, specifically SHAP values, were used to identify key site management decisions and surface water properties that control MAR effectiveness. These findings illustrate the potential of explainable AI and ML surrogate models to enhance the planning and optimization of MAR.

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Publication Details

Journal
Environmental Earth Sciences
Published
2026-02-18
DOI
https://doi.org/10.1007/s12665-026-12825-4
Primary Topic
Groundwater and Isotope Geochemistry
Type
article
Field-Weighted Citation Impact
0.00

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article

Predicting groundwater storage from seasonal managed aquifer recharge: insights from machine learning and explainable AI techniques

Valdrich J. Fernandes, Ruud Bartholomeus, Perry G. B. de Louw, Coen J. Ritsema
Environmental Earth Sciences
Groundwater and Isotope Geochemistry
article

Predicting groundwater storage from seasonal managed aquifer recharge: insights from machine learning and explainable AI techniques

Valdrich J. Fernandes, Ruud Bartholomeus, Perry G. B. de Louw, Coen J. Ritsema
article en

Abstract

Managed Aquifer Recharge (MAR) is widely used to enhance groundwater storage and support sustainable water use. To support site selection and planning, Machine Learning (ML) models are increasingly used as computationally efficient surrogates for traditional numerical models. While ML has shown promise for steady-state simulations, capturing transient responses remains a challenge, yet these are essential for understanding how recharged water is retained through dry periods. In this study, we use ML to model transient MAR effects by decomposing the groundwater storage time series after recharge ceases into two components: the MAR-response and a decay coefficient, assuming exponential storage decline. This simplified representation captures long-term storage dynamics, with U-Net and XGBoost accurately predict these components (R<sup>2</sup> > 0.82) for the Baakse Beek catchment in the sandy, drought-sensitive soils of the Netherlands. The trained models are computationally efficient, making large-scale scenario testing and optimization feasible. Explainable AI techniques, specifically SHAP values, were used to identify key site management decisions and surface water properties that control MAR effectiveness. These findings illustrate the potential of explainable AI and ML surrogate models to enhance the planning and optimization of MAR.

Environmental Earth SciencesVol. 85(5)
Deltares (NL), KWR Water Research Institute (NL), Wageningen University & Research (NL)
Nederlandse Organisatie voor Wetenschappelijk Onderzoek, Wageningen University and Research
Openalex Percentile: Top 53%
Groundwater and Isotope Geochemistry
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Predicting groundwater storage from seasonal managed aquifer recharge: insights from machine learning and explainable AI techniques — Valdrich J. Fernandes, Ruud Bartholomeus, et al. · Environmental Earth Sciences (2026) | TGRS Research Map | TGRS