Inherited burden for disease predisposition in diverse populations

We leveraged allele frequencies from gnomAD, Regeneron Genetics Center Million Exome and Turkish Variome for 4591 disease genes from PanelApp and OMIM, and identified 97,135 pathogenic and 478,263 likely pathogenic variants using an American College of Medical Genetics and Genomics-based classifier. This expanded pathogenic and likely pathogenic variants nearly six-fold. On average, an individual is born with 4.70 pathogenic or likely pathogenic variants, of which 1.66 are compatible with a Mendelian condition at the genotype level; 1 in 11 has an actionable genotype, and 382 genes are candidates for carrier screening. A genome-first approach revealed the likelihood of having a genotype compatible with disease in 13 ICD-10 disease groups, for example, congenital (1 in 2.70), musculoskeletal/connective (1 in 3.00) and blood/immune (1 in 3.07 individuals). Evidence-based genetic epidemiology demonstrates the potential of personalized medicine for the implementation of early preventive measures and incentivization of lifestyle changes to enhance healthspan and lifespan.

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Publication Details

Journal
npj Genomic Medicine
Published
2026-02-18
DOI
https://doi.org/10.1038/s41525-026-00552-5
Primary Topic
Genomics and Rare Diseases
Type
article
Field-Weighted Citation Impact
0.00

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article

Inherited burden for disease predisposition in diverse populations

Ayse Nazlı Basak, Barış Kayaalp, Jean-Laurent Casanova, Tayfun Özçelik
npj Genomic Medicine
Genomics and Rare Diseases
article

Inherited burden for disease predisposition in diverse populations

Ayse Nazlı Basak, Barış Kayaalp, Jean-Laurent Casanova, Tayfun Özçelik
article en

Abstract

We leveraged allele frequencies from gnomAD, Regeneron Genetics Center Million Exome and Turkish Variome for 4591 disease genes from PanelApp and OMIM, and identified 97,135 pathogenic and 478,263 likely pathogenic variants using an American College of Medical Genetics and Genomics-based classifier. This expanded pathogenic and likely pathogenic variants nearly six-fold. On average, an individual is born with 4.70 pathogenic or likely pathogenic variants, of which 1.66 are compatible with a Mendelian condition at the genotype level; 1 in 11 has an actionable genotype, and 382 genes are candidates for carrier screening. A genome-first approach revealed the likelihood of having a genotype compatible with disease in 13 ICD-10 disease groups, for example, congenital (1 in 2.70), musculoskeletal/connective (1 in 3.00) and blood/immune (1 in 3.07 individuals). Evidence-based genetic epidemiology demonstrates the potential of personalized medicine for the implementation of early preventive measures and incentivization of lifestyle changes to enhance healthspan and lifespan.

npj Genomic MedicineVol. 11(1)
Koç University (TR), Inserm (FR), Bilkent University (TR), Université Paris Cité (FR), Hospital for Sick Children Pediatric Center (US), Philip Morris International (United States) (US), Child Health and Development Institute (US), Institut des Maladies Génétiques Imagine (FR), Rockefeller University (US), Icahn School of Medicine at Mount Sinai (US)
Fondation Leducq, Türkiye Bilimler Akademisi
Openalex Percentile: Top 49%
Genomics and Rare Diseases
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Inherited burden for disease predisposition in diverse populations — Ayse Nazlı Basak, Barış Kayaalp, et al. · npj Genomic Medicine (2026) | TGRS Research Map | TGRS