Conformation-selective detection of residues in solid proteins under magic-angle-spinning

We demonstrate here a pulse sequence based on rotational-echo double resonance (REDOR) that can help distinguish resonances based on the ψ-torsion angle, which allows it to distinguish α-helical and β-sheet regions in solid proteins under magic-angle-spinning. The method relies on conformation-dependent differences in distances between an amide [Formula: see text]H and amide [Formula: see text]N nuclei not covalently attached to it. Dephasing from this remote [Formula: see text]N nucleus is obtained in presence of the much stronger one-bond dipole-dipole coupling by using the [Formula: see text]-REDOR sequence. Experiments are demonstrated on perdeuterated (and 70% backexchanged) sample of uniformly [Formula: see text]C, [Formula: see text]N labeled model protein GB1 at the magic-angle spinning frequency of 41.67 kHz. This method will be useful in simplifying chemical-shift assignments in proteins where the structure is already known, and we anticipate a direct application in determining secondary structures without relying on [Formula: see text]C chemical-shifts.

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Publication Details

Journal
Journal of Biomolecular NMR
Published
2026-02-17
DOI
https://doi.org/10.1007/s10858-025-00482-x
Primary Topic
Advanced NMR Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Conformation-selective detection of residues in solid proteins under magic-angle-spinning

Kaustubh R. Mote, Pravin P. Taware, Pragyan P. Parida
Journal of Biomolecular NMR
Advanced NMR Techniques and Applications
article

Conformation-selective detection of residues in solid proteins under magic-angle-spinning

Kaustubh R. Mote, Pravin P. Taware, Pragyan P. Parida
article en

Abstract

We demonstrate here a pulse sequence based on rotational-echo double resonance (REDOR) that can help distinguish resonances based on the ψ-torsion angle, which allows it to distinguish α-helical and β-sheet regions in solid proteins under magic-angle-spinning. The method relies on conformation-dependent differences in distances between an amide [Formula: see text]H and amide [Formula: see text]N nuclei not covalently attached to it. Dephasing from this remote [Formula: see text]N nucleus is obtained in presence of the much stronger one-bond dipole-dipole coupling by using the [Formula: see text]-REDOR sequence. Experiments are demonstrated on perdeuterated (and 70% backexchanged) sample of uniformly [Formula: see text]C, [Formula: see text]N labeled model protein GB1 at the magic-angle spinning frequency of 41.67 kHz. This method will be useful in simplifying chemical-shift assignments in proteins where the structure is already known, and we anticipate a direct application in determining secondary structures without relying on [Formula: see text]C chemical-shifts.

Journal of Biomolecular NMRVol. 80(1)
Northwestern University (US), TIFR Centre for Interdisciplinary Sciences (IN)
Tata Institute of Fundamental Research, National Institutes of Health, National Institute of General Medical Sciences
Openalex Percentile: Top 54%
Advanced NMR Techniques and Applications
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