Structural and mechanistic insights into azetidine-associated αKG-NHFe enzyme OkaE with multifunctional catalysis
α-Ketoglutarate-dependent mononuclear non-haem iron (αKG-NHFe) enzymes are catalytically versatile, yet OkaE is unique for synthesizing azetidine rings via C-C bond formation. Here, we report the unexpected multifunctionality of OkaE, which catalyzes sequential oxidations. Isotopic labelling studies demonstrate that a second O₂ molecule participates in sequential epoxidation and ring cleavage, incorporating two oxygen atoms within a single catalytic cycle to form the previously unknown structure, neuokaramine IV. Crystal structures of the OkaE•Co<sup>II</sup>•αKG•okaramine A complex unveil a unique methionine-π interaction network that facilitates substrate binding. Mutational and crystallographic analyses suggest this network fine-tunes substrate orientation relative to the metallo-centre, activating distinct reaction pathways at the 3a-OH or C8a positions. QM/MM simulations indicate that dynamic rotation of the Fe<sup>IV</sup>=O species initiates the cycle, enabling reaction bifurcation. This study elucidates the structural and mechanistic basis of OkaE's reactivity, highlighting its potential as a programmable biocatalyst for natural product diversification.
Authors
- Rongjie Wu (ORCID: https://orcid.org/0000-0002-4719-0919)
- Xueting Liu
- Nathchar Naowarojna (ORCID: https://orcid.org/0000-0002-7952-3458)
- Mengxi Ju
- Xinye Wang (ORCID: https://orcid.org/0009-0005-0765-7245)
- Tom Hsiang
- Xi Zhang (ORCID: https://orcid.org/0000-0002-4638-3997)
- Lixin Zhang (ORCID: https://orcid.org/0000-0003-0268-6774)
- Bin Zhu (ORCID: https://orcid.org/0000-0003-1085-1231)
- Zhekai Xie
- Pinghua Liu
- Yao Nie
- Junjie Yu
- Yongtao Xie
- Tonghai Liu
- Yaohong Dong
- Linlu Ping
- Wupeng Yan
- Biyu Gong
Institutions
- Boston University (US)
- Jiangnan University (CN)
- East China University of Science and Technology (CN)
- Sun Yat-sen University (CN)
- Ludong University (CN)
- Shanghai Jiao Tong University (CN)
- Hainan University (CN)
- Sakon Nakhon Rajabhat University (TH)
- State Key Laboratory of Bioreactor Engineering
- University of Guelph (CA)
Publication Details
- Journal
- Nature Communications
- Published
- 2026-02-17
- DOI
- https://doi.org/10.1038/s41467-026-69519-5
- Primary Topic
- Metalloenzymes and iron-sulfur proteins
- Type
- article
- Field-Weighted Citation Impact
- 0.00