Abstract PS5-07-18: Advancing personalized treatment of patients with metastatic breast cancer by functional drug screening and IMC profiling

Abstract Background: Worldwide, nearly 2.6 million women are diagnosed annually with breast cancer and 685 000 lives are lost to the disease, the vast majority due to drug-resistant metastases. Although new therapies significantly increased cure rates for early-stage breast cancer, the situation for metastatic disease has hardly changed. Cutting-edge technologies may help characterize the cancer better and tailor therapy decision. Testing drugs on ex-vivo avatar models of patients’ tumors (i.e., personalized treatment) coupled with their in-depth characterization raises the hope of identifying more efficacious treatments. This should also spare the patients the side effects of ineffective treatments. Methodes: We have initiated the nation-wide Swiss Personalized Oncology National Data Stream (SPO-NDS) study that uses a variety of OMICs to inform clinical decision making for patients with advanced breast cancer. We have been using high-resolution image-based functional drug screening on patient-derived organoids (PDO). We pre-emptively tested drug’s efficacy, alone or in combination, on tissue biopsies taken upon disease progression on standard-of-care treatment (any line). Freshly isolated tumour cells were grown in 3D-culture, which retain the patient’s molecular and cellular characteristics. This has been combined with high-resolution imaging mass cytometry (IMC) which enables the analysis of dozens of markers at single-cell resolution while preserving spatial tumor architecture, and informing about tumor content, immune cell infiltration, presence of a specific target, or activation of specific pathways. The results of our studies were integrated into a molecular summary report, discussed at a Swisswide interdisciplinary molecular tumour board, yielding patient-specific cancer vulnerabilities and informing highly-personalized treatment recommendations. The future development of these technologies as a routine tool in the clinics could be of paramount importance to provide tailored therapies to the unique genomic, molecular, and clinical characteristics of each patient’s disease. Conclusion: This trial-in-progress supports the feasibility of using functional drug screening and multi-OMIC profiling to inform personalized treatment in advanced breast cancer. Citation Format: M. Vetter, C. Jehanno, S. Foo, A. Rouchon, Y. Blum, A. Mock, M. Diepenbruck, E. Bartoszek, L. Toniato, M. Kloc, J. Gomez-Miragaya, G. Boot, S. Muenst-Soysal, K. Mertz, V. Kölzer, R. Bill, A. Ring, B. Kasenda, C. Zech, A. Oseledchyk, C. Kurzeder, W. Weber, B. Bodenmiller, A. Wicki, M. Bentires-Alj, National Data Stream Consortium Switzerland. Advancing personalized treatment of patients with metastatic breast cancer by functional drug screening and IMC profiling [abstract]. In: Proceedings of the San Antonio Breast Cancer Symposium 2025; 2025 Dec 9-12; San Antonio, TX. Philadelphia (PA): AACR; Clin Cancer Res 2026;32(4 Suppl):Abstract nr PS5-07-18.

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Journal
Clinical Cancer Research
Published
2026-02-17
DOI
https://doi.org/10.1158/1557-3265.sabcs25-ps5-07-18
Primary Topic
Single-cell and spatial transcriptomics
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article
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article

Abstract PS5-07-18: Advancing personalized treatment of patients with metastatic breast cancer by functional drug screening and IMC profiling

Anton Oseledchyk, Ewelina Magdalena Bartoszek, Alexander Ring, Adelin Rouchon et al.
Clinical Cancer Research
Single-cell and spatial transcriptomics
article

Abstract PS5-07-18: Advancing personalized treatment of patients with metastatic breast cancer by functional drug screening and IMC profiling

Anton Oseledchyk, Ewelina Magdalena Bartoszek, Alexander Ring, Adelin Rouchon, Jorge Gómez‐Miragaya, Kirsten D. Mertz, Charly Jehanno, Marcus Vetter, Benjamin Kasenda, Sok Lin Foo, Viktor Kölzer, W. P. Weber, A. Wicki, B. Bodenmiller, L. Toniato, M. Diepenbruck, G. Boot, Y. Blum, M. Kloc, S. Muenst-Soysal, C. Kurzeder, M. Bentires-Alj, R. Bill, A. Mock, C. Zech
article en

Abstract

Abstract Background: Worldwide, nearly 2.6 million women are diagnosed annually with breast cancer and 685 000 lives are lost to the disease, the vast majority due to drug-resistant metastases. Although new therapies significantly increased cure rates for early-stage breast cancer, the situation for metastatic disease has hardly changed. Cutting-edge technologies may help characterize the cancer better and tailor therapy decision. Testing drugs on ex-vivo avatar models of patients’ tumors (i.e., personalized treatment) coupled with their in-depth characterization raises the hope of identifying more efficacious treatments. This should also spare the patients the side effects of ineffective treatments. Methodes: We have initiated the nation-wide Swiss Personalized Oncology National Data Stream (SPO-NDS) study that uses a variety of OMICs to inform clinical decision making for patients with advanced breast cancer. We have been using high-resolution image-based functional drug screening on patient-derived organoids (PDO). We pre-emptively tested drug’s efficacy, alone or in combination, on tissue biopsies taken upon disease progression on standard-of-care treatment (any line). Freshly isolated tumour cells were grown in 3D-culture, which retain the patient’s molecular and cellular characteristics. This has been combined with high-resolution imaging mass cytometry (IMC) which enables the analysis of dozens of markers at single-cell resolution while preserving spatial tumor architecture, and informing about tumor content, immune cell infiltration, presence of a specific target, or activation of specific pathways. The results of our studies were integrated into a molecular summary report, discussed at a Swisswide interdisciplinary molecular tumour board, yielding patient-specific cancer vulnerabilities and informing highly-personalized treatment recommendations. The future development of these technologies as a routine tool in the clinics could be of paramount importance to provide tailored therapies to the unique genomic, molecular, and clinical characteristics of each patient’s disease. Conclusion: This trial-in-progress supports the feasibility of using functional drug screening and multi-OMIC profiling to inform personalized treatment in advanced breast cancer. Citation Format: M. Vetter, C. Jehanno, S. Foo, A. Rouchon, Y. Blum, A. Mock, M. Diepenbruck, E. Bartoszek, L. Toniato, M. Kloc, J. Gomez-Miragaya, G. Boot, S. Muenst-Soysal, K. Mertz, V. Kölzer, R. Bill, A. Ring, B. Kasenda, C. Zech, A. Oseledchyk, C. Kurzeder, W. Weber, B. Bodenmiller, A. Wicki, M. Bentires-Alj, National Data Stream Consortium Switzerland. Advancing personalized treatment of patients with metastatic breast cancer by functional drug screening and IMC profiling [abstract]. In: Proceedings of the San Antonio Breast Cancer Symposium 2025; 2025 Dec 9-12; San Antonio, TX. Philadelphia (PA): AACR; Clin Cancer Res 2026;32(4 Suppl):Abstract nr PS5-07-18.

Clinical Cancer ResearchVol. 32(4_Supplement)
University Hospital of Bern (CH), University Hospital of Basel (CH), Institute for Biomedical Engineering (CH), Kantonsspital Baselland (CH), University Hospital of Zurich (CH), Psychiatry Baselland (CH), Department of Biomedicine Basel (CH)
Openalex Percentile: Top 53%
Single-cell and spatial transcriptomics
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