The chromosomal genome sequence of the carnivorous sponge, Lycopodina hypogea (Vacelet & Boury-Esnault, 1996) (Poecilosclerida: Cladorhizidae) and its associated microbial metagenome sequences
We present a genome assembly from an individual <i>Lycopodina hypogea</i> (carnivorous sponge; Porifera; Demospongiae; Poecilosclerida; Cladorhizidae). The genome sequence has a total length of 235.10 megabases. Most of the assembly (98.85%) is scaffolded into 15 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 31.1 kilobases. Gene annotation of this assembly by Ensembl identified 16 317 protein-coding genes. From the metagenome data we recovered 39 bins, of which 27 were high-quality MAGs, including four fully circularised genomes. The MAGs included archaea and bacteria involved in nitrification and sulfate-reduction as well as known sponge symbionts affiliated with Gammaproteobacteria ( <i>Candidatus</i> Spongiihabitans, Porisulfidus) and Acidimicrobiales ( <i>Candidatus</i> Poriferisodalaceae), among others.
Authors
- U Hentschel
- Toni Pérez
- Noah Gettle (ORCID: https://orcid.org/0000-0003-3407-4086)
- EBI Aquatic Symbiosis Genomics Data Portal Team
- Aquatic Symbiosis Genomics Project Leadership
- Michael Paulini
- Haoyu Niu
- Rebecca O’Brien
- Jean Vacelet
- Eerik Aunin
- Elizabeth Sinclair
- Graeme Oatley
- Victoria McKenna
- Dirk Erpenbeck
- Camilla Santos
Institutions
- Wellcome Sanger Institute (GB)
- GEOMAR Helmholtz Centre for Ocean Research Kiel (DE)
- Bayerische Staatssammlung für Paläontologie und Geologie (DE)
- Institut Méditerranéen de Biodiversité et d'Ecologie Marine et Continentale (FR)
- Institut de Recherche pour le Développement (FR)
- Ludwig-Maximilians-Universität München (DE)
Publication Details
- Journal
- Wellcome Open Research
- Published
- 2026-02-17
- DOI
- https://doi.org/10.12688/wellcomeopenres.25959.1
- Primary Topic
- Marine Sponges and Natural Products
- Type
- article
- Field-Weighted Citation Impact
- 0.00