Environment, taxonomy, and socioeconomics predict non-imperilment in freshwater fishes
Freshwater fishes are among the most threatened taxa, yet conservation assessments remain incomplete for many species. Freshwater fishes provide essential ecosystem services such as food security, recreational opportunities, and cultural significance. Despite heavy alterations to freshwater ecosystems, the reasons for species' sensitivity and resistance to imperilment are unclear. To address this need, we develop a machine learning framework to predict global imperilment status for 10,631 freshwater fish species using a comprehensive set of environmental, socioeconomic, and intrinsic species-level predictors. Using updated IUCN Red List data, we train and validate Random Forest classifiers to distinguish imperiled (Vulnerable, Endangered, Critically Endangered) from non-imperiled species. We examine the relative influence of 52 variables derived from 12 global sources describing extrinsic environmental and socioeconomic factors and intrinsic species-specific characteristics. Our models achieve higher accuracy for non-imperiled species (90.1%) compared to imperiled species (81.8%), reflecting the greater heterogeneity of threats and conditions driving imperilment. Across models, key predictors include habitat variables, taxonomic order, hydrological characteristics, and disturbance indicators, underscoring the interplay between ecology, geography, and human pressures. This integrative, reproducible approach demonstrates the utility of machine learning for guiding proactive conservation and provides a scalable framework for global biodiversity risk assessment.
Authors
- Sherri L. Johnson (ORCID: https://orcid.org/0000-0002-4223-3465)
- C. Murphy (ORCID: https://orcid.org/0000-0002-3467-6610)
- E. García-Berthou
- Jason Dunham
- J. Andres Olivos
Institutions
- United States Geological Survey (US)
- Oregon Department of Fish and Wildlife (US)
- Oregon State University (US)
- Universitat de Girona (ES)
- Pacific Northwest Research Station (US)
- Maine Department of Inland Fisheries and Wildlife (US)
- Forest and Rangeland Ecosystem Science Center
- University of Maine (US)
Publication Details
- Journal
- Nature Communications
- Published
- 2026-02-16
- DOI
- https://doi.org/10.1038/s41467-025-68154-w
- Primary Topic
- Fish Ecology and Management Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- U.S. Department of Agriculture
- U.S. Geological Survey
- National Institute of Food and Agriculture