Complete chloroplast genome data of Plumbago auriculata f. alba (Pasq.) Z. X. Peng, a medicinal and ornamental species

<i>Plumbago auriculata</i> f. <i>alba</i> (Pasq.) Z. X. Peng, a perennial evergreen shrub, is evaluated for both its medicinal properties and ornamental value. It is usually used to treat inflammatory disorders and skin infections, while its white flowers make it a popular landscape plant. In this study, the complete chloroplast genome of <i>Plumbago auriculata</i> f. <i>alba</i> (Pasq.) Z. X. Peng was sequenced using the Illumina HiSeq platform. The circular chloroplast genome has a total length of 169,357 (bp), exhibiting the typical quadripartite structure of angiosperms: a large single-copy (LSC) region of 92,056 bp, a small single-copy (SSC) region of 13,321 bp, and two inverted repeat (IR) regions (IRa and IRb) each of 31,990 bp. A total of 129 genes were annotated, including 84 protein-coding genes (PCGs), 37 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Simple sequence repeat (SSR) analysis identified 104 SSR loci, with mononucleotide repeats (73 loci, 70.19 %) being the most abundant, attended by trinucleotide repeats (13 loci, 12.5 %). Phylogenetic tree showed that <i>P. auriculata</i> f. <i>alba</i> (Pasq.) Z. X. Peng is most closely related to <i>Plumbago auriculata</i> with 100 % bootstrap support. These chloroplast genome data enrich the genetic resources of Plumbaginaceae, providing a foundation for molecular breeding, genetic diversity analysis, and phylogenetic research of <i>Plumbago auriculata</i> complex.

Authors

Institutions

Publication Details

Journal
Data in Brief
Published
2026-02-16
DOI
https://doi.org/10.1016/j.dib.2026.112599
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Complete chloroplast genome data of Plumbago auriculata f. alba (Pasq.) Z. X. Peng, a medicinal and ornamental species

J. Zhang, Shizhen Wang, Songlin Wang, Jiaqiang Zhang et al.
Data in Brief
Genomics and Phylogenetic Studies
article

Complete chloroplast genome data of Plumbago auriculata f. alba (Pasq.) Z. X. Peng, a medicinal and ornamental species

J. Zhang, Shizhen Wang, Songlin Wang, Jiaqiang Zhang, Yuan Zhou, Danbin Xu, Bowei He
article en

Abstract

<i>Plumbago auriculata</i> f. <i>alba</i> (Pasq.) Z. X. Peng, a perennial evergreen shrub, is evaluated for both its medicinal properties and ornamental value. It is usually used to treat inflammatory disorders and skin infections, while its white flowers make it a popular landscape plant. In this study, the complete chloroplast genome of <i>Plumbago auriculata</i> f. <i>alba</i> (Pasq.) Z. X. Peng was sequenced using the Illumina HiSeq platform. The circular chloroplast genome has a total length of 169,357 (bp), exhibiting the typical quadripartite structure of angiosperms: a large single-copy (LSC) region of 92,056 bp, a small single-copy (SSC) region of 13,321 bp, and two inverted repeat (IR) regions (IRa and IRb) each of 31,990 bp. A total of 129 genes were annotated, including 84 protein-coding genes (PCGs), 37 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Simple sequence repeat (SSR) analysis identified 104 SSR loci, with mononucleotide repeats (73 loci, 70.19 %) being the most abundant, attended by trinucleotide repeats (13 loci, 12.5 %). Phylogenetic tree showed that <i>P. auriculata</i> f. <i>alba</i> (Pasq.) Z. X. Peng is most closely related to <i>Plumbago auriculata</i> with 100 % bootstrap support. These chloroplast genome data enrich the genetic resources of Plumbaginaceae, providing a foundation for molecular breeding, genetic diversity analysis, and phylogenetic research of <i>Plumbago auriculata</i> complex.

Data in BriefVol. 65
ZheJiang Academy of Agricultural Sciences (CN)
Zhejiang Academy of Agricultural Sciences
Life in Land
Openalex Percentile: Top 54%
Genomics and Phylogenetic Studies
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Complete chloroplast genome data of Plumbago auriculata f. alba (Pasq.) Z. X. Peng, a medicinal and ornamental species — J. Zhang, Shizhen Wang, et al. · Data in Brief (2026) | TGRS Research Map | TGRS