Protocol for isolation of total RNA from mouse whole cochlea using organic solvents

Determining gene expression changes in cochlear components is important for understanding the mechanisms underlying hearing loss. Here, we present a protocol for the isolation of total RNA from mouse cochleae across a wide range of ages (2-25 weeks old) using organic solvent extraction. We describe the steps for obtaining the entire cochlea from mice and isolating high-quality total RNA suitable for further reverse transcription and PCR. For complete details on the use and execution of this protocol, please refer to Rías et al.<sup>1</sup>.

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Publication Details

Journal
STAR Protocols
Published
2026-02-16
DOI
https://doi.org/10.1016/j.xpro.2026.104376
Primary Topic
Hearing, Cochlea, Tinnitus, Genetics
Type
article
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article

Protocol for isolation of total RNA from mouse whole cochlea using organic solvents

Guillermo Spitzmaul, Leonardo Dionisio, Ezequiel Rías
STAR Protocols
Hearing, Cochlea, Tinnitus, Genetics
article

Protocol for isolation of total RNA from mouse whole cochlea using organic solvents

Guillermo Spitzmaul, Leonardo Dionisio, Ezequiel Rías
article en

Abstract

Determining gene expression changes in cochlear components is important for understanding the mechanisms underlying hearing loss. Here, we present a protocol for the isolation of total RNA from mouse cochleae across a wide range of ages (2-25 weeks old) using organic solvent extraction. We describe the steps for obtaining the entire cochlea from mice and isolating high-quality total RNA suitable for further reverse transcription and PCR. For complete details on the use and execution of this protocol, please refer to Rías et al.<sup>1</sup>.

STAR ProtocolsVol. 7(1)
Centro Científico Tecnológico - Bahía Blanca (AR), Universidad Nacional del Sur (AR)
Openalex Percentile: Top 53%
Hearing, Cochlea, Tinnitus, Genetics
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