Fetal–placental Genomic and Epigenomic Crosstalk in Fetal Growth Restriction: A Systematic Review and Integrative Multi-omic Insight Beyond Placental Insufficiency

Abstract Fetal growth restriction (FGR) remains one of the most complex and unresolved challenges in perinatal medicine, with mounting evidence suggesting that its origins extend beyond placental insufficiency alone. Increasingly, genomic and epigenomic alterations within the fetal–placental unit appear to shape the trajectory of impaired growth; however, the diversity and fragmentation of current studies have hindered a unified understanding of these mechanisms. This systematic review synthesizes multi-omic evidence to clarify how fetal and placental genomic architecture, DNA methylation, imprinting networks, and noncoding RNA signaling converge to influence FGR. A comprehensive search of major databases and registers was conducted in alignment with Preferred Reporting Items for Systematic Reviews and Meta-Analyses 2020 guidelines, yielding 560 records. After screening and eligibility assessment, 37 studies met the inclusion criteria, of which 20 were identified as low-risk core literature based on Risk of Bias in Systematic Reviews appraisal. Across studies, consistent patterns emerged: dysregulation of imprinted genes such as pleomorphic adenoma gene-like 1 ( PLAGL1 ) and IGF2; broad methylation disturbances involving growth and metabolic pathways; sex-dimorphic expression of long noncoding RNAs; and microRNA-driven disruption of angiogenic signaling. Evidence from confined placental mosaicism and fetal genetic variants further underscores the role of genomic instability in modifying placental development. Collectively, these findings reveal a coordinated network of fetal–placental genomic and epigenomic interactions that precede the classical physiological features of placental insufficiency. Understanding these molecular intersections not only reframes the pathophysiology of FGR but also highlights emerging opportunities for integrative biomarker panels, early diagnostic strategies, and precision obstetric interventions. This review provides an updated, mechanistically anchored synthesis intended to guide future translational and clinical research in the field.

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Publication Details

Journal
Dr Sulaiman Al Habib Medical Journal
Published
2025-10-01
DOI
https://doi.org/10.4103/dshmj.dshmj_65_25
Primary Topic
Pregnancy and preeclampsia studies
Type
article
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article

Fetal–placental Genomic and Epigenomic Crosstalk in Fetal Growth Restriction: A Systematic Review and Integrative Multi-omic Insight Beyond Placental Insufficiency

Ridwan Abdullah Putra, Wiku Andonotopo, Eric Edwin Yuliantara, Cut Meurah Yeni et al.
Dr Sulaiman Al Habib Medical Journal
Pregnancy and preeclampsia studies
article

Fetal–placental Genomic and Epigenomic Crosstalk in Fetal Growth Restriction: A Systematic Review and Integrative Multi-omic Insight Beyond Placental Insufficiency

Ridwan Abdullah Putra, Wiku Andonotopo, Eric Edwin Yuliantara, Cut Meurah Yeni, Ernawati Darmawan, Dudy Aldiansyah, Milan Stanojević, Laksmana Adi Krista Nugraha, Waskita Ekamaheswara Kasumba Andanaputra, Wibisana Andika Krista Dharma, Muhammad Adrianes Bachnas, Efendi Lukas, Anita Deborah Anwar, Aloysius Suryawan, I Nyoman Hariyasa Sanjaya, Anak Agung Gede Putra Wiradnyana, Anak Agung Ngurah Jaya Kusuma, Mochammad Besari Adi Pramono, Khanisyah Erza Gumilar, Julian Dewantiningrum, Wisnu Prabowo, Muhammad Ilham Aldika Akbar
article en

Abstract

Abstract Fetal growth restriction (FGR) remains one of the most complex and unresolved challenges in perinatal medicine, with mounting evidence suggesting that its origins extend beyond placental insufficiency alone. Increasingly, genomic and epigenomic alterations within the fetal–placental unit appear to shape the trajectory of impaired growth; however, the diversity and fragmentation of current studies have hindered a unified understanding of these mechanisms. This systematic review synthesizes multi-omic evidence to clarify how fetal and placental genomic architecture, DNA methylation, imprinting networks, and noncoding RNA signaling converge to influence FGR. A comprehensive search of major databases and registers was conducted in alignment with Preferred Reporting Items for Systematic Reviews and Meta-Analyses 2020 guidelines, yielding 560 records. After screening and eligibility assessment, 37 studies met the inclusion criteria, of which 20 were identified as low-risk core literature based on Risk of Bias in Systematic Reviews appraisal. Across studies, consistent patterns emerged: dysregulation of imprinted genes such as pleomorphic adenoma gene-like 1 ( PLAGL1 ) and IGF2; broad methylation disturbances involving growth and metabolic pathways; sex-dimorphic expression of long noncoding RNAs; and microRNA-driven disruption of angiogenic signaling. Evidence from confined placental mosaicism and fetal genetic variants further underscores the role of genomic instability in modifying placental development. Collectively, these findings reveal a coordinated network of fetal–placental genomic and epigenomic interactions that precede the classical physiological features of placental insufficiency. Understanding these molecular intersections not only reframes the pathophysiology of FGR but also highlights emerging opportunities for integrative biomarker panels, early diagnostic strategies, and precision obstetric interventions. This review provides an updated, mechanistically anchored synthesis intended to guide future translational and clinical research in the field.

Dr Sulaiman Al Habib Medical JournalVol. 7(4)
Diponegoro University (ID), Sebelas Maret University (ID), Udayana University (ID), Maranatha Christian University (ID), Surya University (ID), Universitas Gadjah Mada (ID), Universitas Syiah Kuala (ID), Universitas Airlangga (ID), Universitas Sumatera Utara (ID), Medical University of Warsaw (PL), Sriwijaya University (ID), Dr. Kariadi Hospital (ID), Dr. Hasan Sadikin General Hospital (ID), Padjadjaran University (ID), Hasanuddin University (ID)
Reduced inequalities
Openalex Percentile: Top 21%
Pregnancy and preeclampsia studies
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