Computational Optimization of CRISPR-Cas13a sgRNAs Targeting the SARS-CoV-2 Spike Gene for SHERLOCK-Based Diagnostics

This study successfully designed an sgRNA with high sensitivity and specificity for rapid SARS-CoV-2 detection using the CRISPR-Cas13a system, informed by genomic analysis of Iranian isolates. The proposed approach provides an efficient framework for the rapid design and deployment of CRISPR-based diagnostic tools applicable to diverse viral pathogens.

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Publication Details

Journal
Evolutionary Bioinformatics
Published
2026-02-01
DOI
https://doi.org/10.1177/11769343251414318
Primary Topic
CRISPR and Genetic Engineering
Type
article
Field-Weighted Citation Impact
0.00
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article

Computational Optimization of CRISPR-Cas13a sgRNAs Targeting the SARS-CoV-2 Spike Gene for SHERLOCK-Based Diagnostics

Mohammad Hossein Sanati, Fatemeh Akbarian, Maryam Ahmadzadeh, Fatemeh Farrokhi et al.
Evolutionary Bioinformatics
CRISPR and Genetic Engineering
article

Computational Optimization of CRISPR-Cas13a sgRNAs Targeting the SARS-CoV-2 Spike Gene for SHERLOCK-Based Diagnostics

Mohammad Hossein Sanati, Fatemeh Akbarian, Maryam Ahmadzadeh, Fatemeh Farrokhi, Hanieh Motaharirad
article en

Abstract

This study successfully designed an sgRNA with high sensitivity and specificity for rapid SARS-CoV-2 detection using the CRISPR-Cas13a system, informed by genomic analysis of Iranian isolates. The proposed approach provides an efficient framework for the rapid design and deployment of CRISPR-based diagnostic tools applicable to diverse viral pathogens.

Evolutionary BioinformaticsVol. 22
Royan Institute (IR), Academic Center for Education, Culture and Research (IR), Sadra Institute Of Higher Education (IR), National Institute of Genetic Engineering and Biotechnology (IR)
Openalex Percentile: Top 56%
CRISPR and Genetic Engineering
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Computational Optimization of CRISPR-Cas13a sgRNAs Targeting the SARS-CoV-2 Spike Gene for SHERLOCK-Based Diagnostics — Mohammad Hossein Sanati, Fatemeh Akbarian, et al. · Evolutionary Bioinformatics (2026) | TGRS Research Map | TGRS