datadrivenhypothesis.org: A resource for metabolic gene discovery through integrated pathway co-essentiality mapping

datadrivenhypothesis.org (DDH) integrates gene dependency, expression, literature data, and beyond from ~20,000 human genes to reveal hidden metabolic connections. Through pathway-level co-essentiality analysis with novelty scoring, DDH uncovered unexpected links including Complex II coupled to purine nucleotide biosynthesis. This broad platform offers intuitive tools for hypothesis generation via gene queries, pathway analysis, and network visualization, plus publication-ready downloads. Automated updates make DDH a dynamic resource, bridging genes with unknown function to actionable metabolic insights.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-02-12
DOI
https://doi.org/10.64898/2026.02.11.705287
Primary Topic
Bioinformatics and Genomic Networks
Type
article
Field-Weighted Citation Impact
0.00
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article

datadrivenhypothesis.org: A resource for metabolic gene discovery through integrated pathway co-essentiality mapping

Matthew D. Hirschey, Pol Castellano‐Escuder, J. F. N. Bradley
bioRxiv (Cold Spring Harbor Laboratory)
Bioinformatics and Genomic Networks
article

datadrivenhypothesis.org: A resource for metabolic gene discovery through integrated pathway co-essentiality mapping

Matthew D. Hirschey, Pol Castellano‐Escuder, J. F. N. Bradley
article en

Abstract

datadrivenhypothesis.org (DDH) integrates gene dependency, expression, literature data, and beyond from ~20,000 human genes to reveal hidden metabolic connections. Through pathway-level co-essentiality analysis with novelty scoring, DDH uncovered unexpected links including Complex II coupled to purine nucleotide biosynthesis. This broad platform offers intuitive tools for hypothesis generation via gene queries, pathway analysis, and network visualization, plus publication-ready downloads. Automated updates make DDH a dynamic resource, bridging genes with unknown function to actionable metabolic insights.

bioRxiv (Cold Spring Harbor Laboratory)
National University of Singapore (SG), Duke University (US)
Openalex Percentile: Top 58%
Bioinformatics and Genomic Networks
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datadrivenhypothesis.org: A resource for metabolic gene discovery through integrated pathway co-essentiality mapping — Matthew D. Hirschey, Pol Castellano‐Escuder, et al. · bioRxiv (Cold Spring Harbor Laboratory) (2026) | TGRS Research Map | TGRS