Bench and Byte: Synthesis, DFT, ADMET, and Molecular Docking on a Pair of Antibacterial Schiff Bases Targeting DNA Gyrase

ABSTRACT Schiff bases are privileged azomethine pharmacophores with diverse bioactivity. In this report, two new hydrazine‐derived Schiff bases, L 1 and L 2, were synthesized. The structures were confirmed by experimental approaches involving IR, UV–vis, 1 H, and 1 3 C NMR spectroscopy and showed strong correlation with theoretical computational predictions. Molecular reactivity was explored using DFT (B3LYP/6‐311G(d,p), SMD/water) through frontier orbitals, electrostatic potential, and global reactivity descriptors. Antibacterial evaluation against Escherichia coli , Staphylococcus aureus , and Pseudomonas aeruginosa showed strain‐selective potency: L 1 was most active against S. aureus and E. coli (MIC 4.9 and 6.5 µg/mL), while L 2 displayed moderate activity against P. aeruginosa (MIC 8.4 µg/mL). Ciprofloxacin remained the strongest reference (MIC 0.049–0.521 µg/mL). Docking with DNA gyrase (PDB ID 6F86) indicated favorable binding for L 1 (−6.4 kcal/mol) and L 2 (−6.0 kcal/mol) vs. ciprofloxacin (−7.0 kcal/mol). ADMET predictions supported acceptable drug‐likeness and low toxicity. These results highlight hydrazine‐based Schiff bases as promising leads for antibacterial design against multidrug resistance.

Authors

Institutions

Publication Details

Journal
ChemistrySelect
Published
2026-02-01
DOI
https://doi.org/10.1002/slct.202506756
Primary Topic
Metal complexes synthesis and properties
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Bench and Byte: Synthesis, DFT, ADMET, and Molecular Docking on a Pair of Antibacterial Schiff Bases Targeting DNA Gyrase

Israa J. Hakeem, Abdulrahman A. Alsimaree, Munirah M. Al‐Rooqi, Jan Mohammad Mir et al.
ChemistrySelect
Metal complexes synthesis and properties
article

Bench and Byte: Synthesis, DFT, ADMET, and Molecular Docking on a Pair of Antibacterial Schiff Bases Targeting DNA Gyrase

Israa J. Hakeem, Abdulrahman A. Alsimaree, Munirah M. Al‐Rooqi, Jan Mohammad Mir, Saeed S. Samman, Abdulaziz M. Almohyawi, Mustafa S. Alluhaibi, Ziad Moussa, Saleh A. Ahmed, Sultan I. Alkubaysi
article en

Abstract

ABSTRACT Schiff bases are privileged azomethine pharmacophores with diverse bioactivity. In this report, two new hydrazine‐derived Schiff bases, L 1 and L 2, were synthesized. The structures were confirmed by experimental approaches involving IR, UV–vis, 1 H, and 1 3 C NMR spectroscopy and showed strong correlation with theoretical computational predictions. Molecular reactivity was explored using DFT (B3LYP/6‐311G(d,p), SMD/water) through frontier orbitals, electrostatic potential, and global reactivity descriptors. Antibacterial evaluation against Escherichia coli , Staphylococcus aureus , and Pseudomonas aeruginosa showed strain‐selective potency: L 1 was most active against S. aureus and E. coli (MIC 4.9 and 6.5 µg/mL), while L 2 displayed moderate activity against P. aeruginosa (MIC 8.4 µg/mL). Ciprofloxacin remained the strongest reference (MIC 0.049–0.521 µg/mL). Docking with DNA gyrase (PDB ID 6F86) indicated favorable binding for L 1 (−6.4 kcal/mol) and L 2 (−6.0 kcal/mol) vs. ciprofloxacin (−7.0 kcal/mol). ADMET predictions supported acceptable drug‐likeness and low toxicity. These results highlight hydrazine‐based Schiff bases as promising leads for antibacterial design against multidrug resistance.

ChemistrySelectVol. 11(6)
King Abdulaziz University (SA), Umm al-Qura University (SA), United Arab Emirates University (AE), Shaqra University (SA), Taibah University (SA), University of Jeddah (SA), Islamic University of Science and Technology (IN), Assiut University (EG)
Clean water and sanitation
Openalex Percentile: Top 58%
Metal complexes synthesis and properties
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.