Committors without Descriptors

The study of rare events is one of the major challenges in atomistic simulations, and several enhanced sampling methods toward its solution have been proposed. Recently, it has been suggested that the use of the committor, which provides a precise formal description of rare events, could be of use in this context. We have recently followed up on this suggestion and proposed a committor-based method that promotes frequent transitions between the metastable states of the system and allows extensive sampling of the process transition state ensemble. One of the strengths of our approach is being self-consistent and semiautomatic, exploiting a variational criterion to iteratively optimize a neural-network-based parametrization of the committor, which uses a set of physical descriptors as input. Here, we further automate this procedure by combining our previous method with the expressive power of graph neural networks, which can directly process atomic coordinates rather than descriptors. Besides applications on benchmark systems, we highlight the advantages of a graph-based approach in describing the role of solvent molecules in systems, such as ion pair dissociation or ligand binding.

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Publication Details

Journal
Journal of Chemical Theory and Computation
Published
2026-02-11
DOI
https://doi.org/10.1021/acs.jctc.5c01848
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.00
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article

Committors without Descriptors

Jintu Zhang, Enrico Trizio, Tingjun Hou, Peilin Kang et al.
Journal of Chemical Theory and Computation
Machine Learning in Materials Science
article

Committors without Descriptors

Jintu Zhang, Enrico Trizio, Tingjun Hou, Peilin Kang, Michele Parrinello
article en

Abstract

The study of rare events is one of the major challenges in atomistic simulations, and several enhanced sampling methods toward its solution have been proposed. Recently, it has been suggested that the use of the committor, which provides a precise formal description of rare events, could be of use in this context. We have recently followed up on this suggestion and proposed a committor-based method that promotes frequent transitions between the metastable states of the system and allows extensive sampling of the process transition state ensemble. One of the strengths of our approach is being self-consistent and semiautomatic, exploiting a variational criterion to iteratively optimize a neural-network-based parametrization of the committor, which uses a set of physical descriptors as input. Here, we further automate this procedure by combining our previous method with the expressive power of graph neural networks, which can directly process atomic coordinates rather than descriptors. Besides applications on benchmark systems, we highlight the advantages of a graph-based approach in describing the role of solvent molecules in systems, such as ion pair dissociation or ligand binding.

Journal of Chemical Theory and ComputationVol. 22(4)
Italian Institute of Technology (IT), Scientific Simulations (United States) (US), Artificial Intelligence in Medicine (Canada) (CA), Zhejiang University (CN)
Openalex Percentile: Top 60%
Machine Learning in Materials Science
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Committors without Descriptors — Jintu Zhang, Enrico Trizio, et al. · Journal of Chemical Theory and Computation (2026) | TGRS Research Map | TGRS