Cell‐specific transcriptomics and knockout reveal aquaporin function in grass stomatal movements

The high efficiency of grass stomatal movement is believed to be due to their unique four-celled structure, with two dumbbell-shaped guard cells (GCs) flanked by two subsidiary cells (SCs). The molecular interaction between these cells requires further investigation. To investigate genes, including those encoding aquaporins (AQPs), expressed in maize GCs and SCs, RNA sequencing was performed on microdissected GCs and SCs from epidermis harvested during day and night. A CRISPR-based tissue-specific knockout (KO) system was then used to target ZmPIPs belonging to the plasma membrane intrinsic protein1 (PIP1) subfamily in maize GCs or SCs. A general transcriptomic analysis first revealed that genes preferentially expressed in SCs compared with GCs during the day were primarily involved in lipid transport, localization, and metabolism, while genes more highly expressed in GCs were associated with photosynthesis, chloroplasts, and plastids. Interestingly, the expression of several AQP genes varied both spatially and temporally. The KO of ZmPIP1s in GCs resulted in greater stomatal opening than wild-type plants, particularly under mild water-deficit conditions. Overall, these findings reveal transcriptomic specificities between maize GCs and SCs, providing valuable insights into the regulation of rapid stomatal movements in grasses and highlight the role of ZmPIP1s in these processes.

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Publication Details

Journal
New Phytologist
Published
2026-02-17
DOI
https://doi.org/10.1111/nph.71004
Primary Topic
Ion Transport and Channel Regulation
Type
article
Field-Weighted Citation Impact
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article

Cell‐specific transcriptomics and knockout reveal aquaporin function in grass stomatal movements

Sylvain Legay, Maxime Laurent, Valentin Couvreur, Didier Le Thiec et al.
New Phytologist
Ion Transport and Channel Regulation
article

Cell‐specific transcriptomics and knockout reveal aquaporin function in grass stomatal movements

Sylvain Legay, Maxime Laurent, Valentin Couvreur, Didier Le Thiec, Dirk Inzé, Laurens Pauwels, Stijn Aesaer, Lei Ding, Julien Georgery, François Chaumont
article en

Abstract

The high efficiency of grass stomatal movement is believed to be due to their unique four-celled structure, with two dumbbell-shaped guard cells (GCs) flanked by two subsidiary cells (SCs). The molecular interaction between these cells requires further investigation. To investigate genes, including those encoding aquaporins (AQPs), expressed in maize GCs and SCs, RNA sequencing was performed on microdissected GCs and SCs from epidermis harvested during day and night. A CRISPR-based tissue-specific knockout (KO) system was then used to target ZmPIPs belonging to the plasma membrane intrinsic protein1 (PIP1) subfamily in maize GCs or SCs. A general transcriptomic analysis first revealed that genes preferentially expressed in SCs compared with GCs during the day were primarily involved in lipid transport, localization, and metabolism, while genes more highly expressed in GCs were associated with photosynthesis, chloroplasts, and plastids. Interestingly, the expression of several AQP genes varied both spatially and temporally. The KO of ZmPIP1s in GCs resulted in greater stomatal opening than wild-type plants, particularly under mild water-deficit conditions. Overall, these findings reveal transcriptomic specificities between maize GCs and SCs, providing valuable insights into the regulation of rapid stomatal movements in grasses and highlight the role of ZmPIP1s in these processes.

New Phytologist
AgroParisTech (FR), Ghent University (BE), Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (FR), VIB-UGent Center for Plant Systems Biology (BE), Silva (FR), Luxembourg Institute of Science and Technology (LU), UCLouvain (BE)
Clean water and sanitation
Openalex Percentile: Top 59%
Ion Transport and Channel Regulation
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