Proteostasis sustains T cell differentiation potential and tumor-infiltrating lymphocyte function
Tumor-infiltrating lymphocytes (TIL) often fail to restrain tumor growth due to progressive differentiation to an 'exhausted' state. In healthy tissues, tissue-resident memory T cells (T<sub>RM</sub>) maintain protection for years, and patient tumors that contain TIL with T<sub>RM</sub> features are associated with better prognosis. Proteomic and transcriptomic profiling of T cell populations identified proteostasis as a significant factor distinguishing T<sub>RM</sub> and progenitor-exhausted TIL from terminally-exhausted TIL, including loss of E3 ubiquitin ligases NEURL3, RNF149, and WSB1, with accumulation of unfolded proteins in spite of functional proteasome activity. Enforced expression of these ligases by TIL preserved stem-like TCF1<sup>+</sup> populations and improved antitumor function, whereas their knockout impaired TIL and altered T cell differentiation in acute infection. Sustained ligase expression rescued accumulation of unfolded proteins in TIL and improved immunotherapy outcome in preclinical models, highlighting the critical role of proteostasis in TIL function and identifying new avenues for advancing cancer immunotherapy.
Authors
- Brian Koss (ORCID: https://orcid.org/0000-0003-0155-4809)
- Nicole E. Scharping (ORCID: https://orcid.org/0000-0001-9373-4617)
- Angelica Rock (ORCID: https://orcid.org/0009-0007-3360-1709)
- Kennidy K. Takehara (ORCID: https://orcid.org/0000-0002-1990-155X)
- Allison Cafferata (ORCID: https://orcid.org/0009-0007-6157-1885)
- Xuezhen Ge (ORCID: https://orcid.org/0000-0002-5527-6720)
- Maria I. Matias (ORCID: https://orcid.org/0000-0002-2003-0149)
- Ananda W. Goldrath (ORCID: https://orcid.org/0000-0002-5900-508X)
- Amir Ferry (ORCID: https://orcid.org/0000-0003-2884-083X)
- Sydnye L. Shuttleworth (ORCID: https://orcid.org/0000-0003-0400-7106)
- Sara Quon (ORCID: https://orcid.org/0000-0003-3860-3491)
- Giovanni Galletti (ORCID: https://orcid.org/0000-0001-6613-2354)
- Eric J. Bennett (ORCID: https://orcid.org/0000-0002-1201-3314)
- Nick Thao
- Alexander Troy Monell
- Kitty Cheung
- Fulin Jiang
- Maximilian Heeg
- Michael Bauer
- Samuel Myers
Institutions
- La Jolla Institute for Immunology (US)
- University of California San Diego (US)
- Allen Institute for Immunology (US)
- University of Arkansas for Medical Sciences (US)
Publication Details
- Journal
- bioRxiv (Cold Spring Harbor Laboratory)
- Published
- 2026-02-10
- DOI
- https://doi.org/10.64898/2026.02.08.704716
- Primary Topic
- Cancer Immunotherapy and Biomarkers
- Type
- article
- Field-Weighted Citation Impact
- 0.00