MICCAI STS 2024 challenge: Semi-supervised instance-level tooth segmentation in panoramic X-ray and CBCT images

Orthopantomogram (OPGs) and Cone-Beam Computed Tomography (CBCT) are vital for dentistry, but creating large datasets for automated tooth segmentation is hindered by the labor-intensive process of manual instance-level annotation. This research aimed to benchmark and advance semi-supervised learning (SSL) as a solution for this data scarcity problem. We organized the 2nd Semi-supervised Teeth Segmentation (STS 2024) Challenge at MICCAI 2024. We provided a large-scale dataset comprising over 90,000 2D images and 3D axial slices, which includes 2380 OPG images and 330 CBCT scans, all featuring detailed instance-level FDI annotations on part of the data. The challenge attracted 114 (OPG) and 106 (CBCT) registered teams. To ensure algorithmic excellence and full transparency, we rigorously evaluated the valid, open-source submissions from the top 10 (OPG) and top 5 (CBCT) teams, respectively. All successful submissions were deep learning-based SSL methods. The winning semi-supervised models demonstrated impressive performance gains over a fully-supervised nnU-Net baseline trained only on the labeled data. For the 2D OPG track, the top method improved the Instance Affinity (IA) score by over 44 percentage points. For the 3D CBCT track, the winning approach boosted the Instance Dice score by 61 percentage points. This challenge demonstrates the potential benefit benefit of SSL for complex, instance-level medical image segmentation tasks where labeled data is scarce. The most effective approaches consistently leveraged hybrid semi-supervised frameworks that combined knowledge from foundational models like SAM with multi-stage, coarse-to-fine refinement pipelines. Both the challenge dataset and the participants' submitted code have been made publicly available on GitHub (https://github.com/ricoleehduu/STS-Challenge-2024), ensuring transparency and reproducibility.

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Publication Details

Journal
Medical Image Analysis
Published
2026-02-09
DOI
https://doi.org/10.1016/j.media.2026.103986
Primary Topic
Dental Radiography and Imaging
Type
article
Field-Weighted Citation Impact
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article

MICCAI STS 2024 challenge: Semi-supervised instance-level tooth segmentation in panoramic X-ray and CBCT images

Chengyu Wu, Qianni Zhang, Xiaoyang Yu, Jialuo Chen et al.
Medical Image Analysis
Dental Radiography and Imaging
article

MICCAI STS 2024 challenge: Semi-supervised instance-level tooth segmentation in panoramic X-ray and CBCT images

Chengyu Wu, Qianni Zhang, Xiaoyang Yu, Jialuo Chen, Changkai Ji, Xinxu Cai, Zhi Li, Jun Liu, Shi Xu, Jin Liu, Yaqi Wang, Jiaxue Ni, Junqiang Chen, Zhihao Zheng, Huiyu Zhou, Can Han, Hongyuan Zhang, Kaiwen Fu, Dahong Qian, Shuai Wang, Yifan Zhang, Qian Luo, Jing Hao
article en

Abstract

Orthopantomogram (OPGs) and Cone-Beam Computed Tomography (CBCT) are vital for dentistry, but creating large datasets for automated tooth segmentation is hindered by the labor-intensive process of manual instance-level annotation. This research aimed to benchmark and advance semi-supervised learning (SSL) as a solution for this data scarcity problem. We organized the 2nd Semi-supervised Teeth Segmentation (STS 2024) Challenge at MICCAI 2024. We provided a large-scale dataset comprising over 90,000 2D images and 3D axial slices, which includes 2380 OPG images and 330 CBCT scans, all featuring detailed instance-level FDI annotations on part of the data. The challenge attracted 114 (OPG) and 106 (CBCT) registered teams. To ensure algorithmic excellence and full transparency, we rigorously evaluated the valid, open-source submissions from the top 10 (OPG) and top 5 (CBCT) teams, respectively. All successful submissions were deep learning-based SSL methods. The winning semi-supervised models demonstrated impressive performance gains over a fully-supervised nnU-Net baseline trained only on the labeled data. For the 2D OPG track, the top method improved the Instance Affinity (IA) score by over 44 percentage points. For the 3D CBCT track, the winning approach boosted the Instance Dice score by 61 percentage points. This challenge demonstrates the potential benefit benefit of SSL for complex, instance-level medical image segmentation tasks where labeled data is scarce. The most effective approaches consistently leveraged hybrid semi-supervised frameworks that combined knowledge from foundational models like SAM with multi-stage, coarse-to-fine refinement pipelines. Both the challenge dataset and the participants' submitted code have been made publicly available on GitHub (https://github.com/ricoleehduu/STS-Challenge-2024), ensuring transparency and reproducibility.

Medical Image AnalysisVol. 110
Xidian University (CN), University of Leicester (GB), Shandong University (CN), Queen Mary University of London (GB), Shenzhen University (CN), Shanghai Jiao Tong University (CN), Chinese Academy of Sciences (CN), Harbin Institute of Technology (CN), Yunnan Provincial Hospital of Traditional Chinese Medicine (CN), Research Institute of Precision Instruments (Russia) (RU), Zhejiang Hospital (CN), Stomatology Hospital (CN), Yunnan Provincial Infectious Disease Hospital (CN), First Affiliated Hospital Zhejiang University (CN), Hangzhou Dianzi University (CN), University of Hong Kong (HK)
Openalex Percentile: Top 61%
Dental Radiography and Imaging
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