KPGT-Fluor: A Graph Transformer Framework for Accurate Property Prediction of Fluorescent Dyes under Different Solvent Environment

Data-driven machine learning (ML) technologies have become increasingly prevalent in the prediction of the optical properties of fluorescent dyes, especially across diverse solvent environments─a key requirement for the rational design of small solvatochromic systems. Here, we introduce KPGT-Fluor, a novel adaptation of the Knowledge-guided Pretraining of Graph Transformer (KPGT) framework, designed to model solvent-dependent photophysical behavior. Through the integration of solvent molecular descriptors, KPGT-Fluor effectively captures solvent environmental effects that influence optical properties. KPGT-Fluor exhibits strong predictive performance, achieving mean absolute error (MAE) of 10.55 and 12.09 nm for absorption wavelengths (λ<sub>abs</sub>) and emission wavelengths (λ<sub>em</sub>), respectively. For the logarithm of the extinction coefficient (ε) and quantum yield (Φ), the MAE values are 0.104 and 0.081, demonstrating a high accuracy. Compared with the existing models, a comprehensive evaluation across the four key property prediction tasks shows that KPGT-Fluor exhibits a more balanced and competitive overall performance. To further demonstrate the effectiveness of the proposed framework, an external test set containing representative main ring structures was selected. Furthermore, two novel D-π-A molecules were synthesized, and their optical properties in different solvents were experimentally compared with KPGT-Fluor predictions. These results highlight KPGT-Fluor as a powerful tool for predicting and discovering solvatochromic materials.

Authors

Institutions

Publication Details

Journal
Journal of Chemical Information and Modeling
Published
2026-02-09
DOI
https://doi.org/10.1021/acs.jcim.5c02656
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

KPGT-Fluor: A Graph Transformer Framework for Accurate Property Prediction of Fluorescent Dyes under Different Solvent Environment

Nan Zhou, Shaolong Lin, Jiayi Xu, D. Shen et al.
Journal of Chemical Information and Modeling
Machine Learning in Materials Science
article

KPGT-Fluor: A Graph Transformer Framework for Accurate Property Prediction of Fluorescent Dyes under Different Solvent Environment

Nan Zhou, Shaolong Lin, Jiayi Xu, D. Shen, Kui Du, Jiamin Zhong, Li Qin, Zhao Chen, Jintian Lyu
article en

Abstract

Data-driven machine learning (ML) technologies have become increasingly prevalent in the prediction of the optical properties of fluorescent dyes, especially across diverse solvent environments─a key requirement for the rational design of small solvatochromic systems. Here, we introduce KPGT-Fluor, a novel adaptation of the Knowledge-guided Pretraining of Graph Transformer (KPGT) framework, designed to model solvent-dependent photophysical behavior. Through the integration of solvent molecular descriptors, KPGT-Fluor effectively captures solvent environmental effects that influence optical properties. KPGT-Fluor exhibits strong predictive performance, achieving mean absolute error (MAE) of 10.55 and 12.09 nm for absorption wavelengths (λ<sub>abs</sub>) and emission wavelengths (λ<sub>em</sub>), respectively. For the logarithm of the extinction coefficient (ε) and quantum yield (Φ), the MAE values are 0.104 and 0.081, demonstrating a high accuracy. Compared with the existing models, a comprehensive evaluation across the four key property prediction tasks shows that KPGT-Fluor exhibits a more balanced and competitive overall performance. To further demonstrate the effectiveness of the proposed framework, an external test set containing representative main ring structures was selected. Furthermore, two novel D-π-A molecules were synthesized, and their optical properties in different solvents were experimentally compared with KPGT-Fluor predictions. These results highlight KPGT-Fluor as a powerful tool for predicting and discovering solvatochromic materials.

Journal of Chemical Information and ModelingVol. 66(4)
Shaoxing University (CN), Jiangxi Science and Technology Normal University (CN), Faculty (United Kingdom) (GB), Hangzhou Wanxiang Polytechnic (CN), LEK Consulting (United States) (US), Macao Polytechnic University (MO)
Life in Land
Openalex Percentile: Top 63%
Machine Learning in Materials Science
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.