A comprehensive web-based platform for calculation of abiotic stress tolerance indices in plant breeding

Abiotic stress tolerance is a critical trait in plant breeding programs aimed at developing climate-resilient crop varieties. The accurate identification and selection of stress-tolerant genotypes require comprehensive evaluation using multiple mathematical indices. However, the manual calculation of these indices from large-scale experimental datasets is time-consuming, error-prone, and computationally demanding. Here, we present PTSIonline (Plant Tolerance and Sensitivity Indices online, http://87.107.144.237 ), an integrated web-based computational platform designed to streamline the analysis of abiotic stress tolerance indices in crop breeding research. The platform implements 18 widely recognized stress evaluation indices including Tolerance Index (TOL), Mean Productivity (MP), Geometric Mean Productivity (GMP), Harmonic Mean (HM), Stress Susceptibility Index (SSI), Stress Tolerance Index (STI), Yield Index (YI), Yield Stability Index (YSI), Relative Stress Index (RSI), Superiority Index (SI), Abiotic Tolerance Index (ATI), Stress Susceptibility Percentage Index (SSPI), Relative Efficiency Index (REI), Modified Stress Tolerance Indices (K₁STI, K₂STI), Stress Distribution Index (SDI), Drought Index (DI), and Stress Non-Productivity Index (SNPI). PTSIonline features an intuitive user interface that accepts standard experimental data formats and generates comprehensive statistical outputs, visualizations, and genotype rankings within seconds. Comparative analysis demonstrates that PTSIonline provides the most extensive index coverage among available online tools while maintaining computational efficiency suitable for high-throughput phenotyping programs. The platform eliminates computational barriers in stress tolerance research, enabling researchers and plant breeders to rapidly identify superior genotypes from diverse germplasm collections. PTSIonline represents a significant advancement in computational tools for crop improvement under changing environmental conditions.

Authors

Institutions

Publication Details

Journal
Scientific Reports
Published
2026-02-09
DOI
https://doi.org/10.1038/s41598-026-38957-y
Primary Topic
Genetics and Plant Breeding
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A comprehensive web-based platform for calculation of abiotic stress tolerance indices in plant breeding

Hossein Sabouri, Ahmad Jalili, Zohre Shoaei
Scientific Reports
Genetics and Plant Breeding
article

A comprehensive web-based platform for calculation of abiotic stress tolerance indices in plant breeding

Hossein Sabouri, Ahmad Jalili, Zohre Shoaei
article en

Abstract

Abiotic stress tolerance is a critical trait in plant breeding programs aimed at developing climate-resilient crop varieties. The accurate identification and selection of stress-tolerant genotypes require comprehensive evaluation using multiple mathematical indices. However, the manual calculation of these indices from large-scale experimental datasets is time-consuming, error-prone, and computationally demanding. Here, we present PTSIonline (Plant Tolerance and Sensitivity Indices online, http://87.107.144.237 ), an integrated web-based computational platform designed to streamline the analysis of abiotic stress tolerance indices in crop breeding research. The platform implements 18 widely recognized stress evaluation indices including Tolerance Index (TOL), Mean Productivity (MP), Geometric Mean Productivity (GMP), Harmonic Mean (HM), Stress Susceptibility Index (SSI), Stress Tolerance Index (STI), Yield Index (YI), Yield Stability Index (YSI), Relative Stress Index (RSI), Superiority Index (SI), Abiotic Tolerance Index (ATI), Stress Susceptibility Percentage Index (SSPI), Relative Efficiency Index (REI), Modified Stress Tolerance Indices (K₁STI, K₂STI), Stress Distribution Index (SDI), Drought Index (DI), and Stress Non-Productivity Index (SNPI). PTSIonline features an intuitive user interface that accepts standard experimental data formats and generates comprehensive statistical outputs, visualizations, and genotype rankings within seconds. Comparative analysis demonstrates that PTSIonline provides the most extensive index coverage among available online tools while maintaining computational efficiency suitable for high-throughput phenotyping programs. The platform eliminates computational barriers in stress tolerance research, enabling researchers and plant breeders to rapidly identify superior genotypes from diverse germplasm collections. PTSIonline represents a significant advancement in computational tools for crop improvement under changing environmental conditions.

Scientific ReportsVol. 16(1)
Shiraz University of Technology (IR), Gonbad Kavous University (IR)
Gonbad Kavous University
Climate action
Openalex Percentile: Top 62%
Genetics and Plant Breeding
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.