Structure-Based Virtual Screening of Plant-Derived Flavonoids as Putative GLUT9 Binders with Antioxidant Properties

Hyperuricemia affects approximately 20% of the global adult population and serves as the primary etiological factor for gout. Glucose transporter 9 (GLUT9) plays a critical role in renal urate reabsorption, representing a promising therapeutic target for hyperuricemia treatment. This study employed an integrated computational and experimental approach to identify novel flavonoid-based putative GLUT9 binders, combining molecular docking, molecular dynamics (MD) simulations, ADMET prediction, antioxidant evaluation, and density functional theory (DFT) calculations. Eight structurally diverse flavonoids were docked against the human GLUT9 cryo-EM structure, and antioxidant activities were assessed using DPPH, ABTS, and FRAP assays. All tested flavonoids exhibited favorable binding affinities ranging from -7.67 to -9.10 kcal/mol. Epigallocatechin gallate (EGCG) demonstrated the highest binding affinity (-9.10 kcal/mol) with an extensive hydrogen bonding network, while chrysin exhibited the second-highest affinity (-8.35 kcal/mol) with favorable drug-like properties. MD simulations over 100 ns confirmed the structural stability of the complexes. EGCG displayed exceptional antioxidant capacity (DPPH IC<sub>50</sub> = 3.28 μM) superior to ascorbic acid, whereas chrysin showed lower radical scavenging activity despite favorable GLUT9 binding. DFT calculations revealed that higher HOMO energies correlated with enhanced antioxidant activity. These findings suggest that EGCG and chrysin exhibit favorable GLUT9 binding profiles, warranting further functional and pharmacokinetic optimization.

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Publication Details

Journal
Molecules
Published
2026-02-09
DOI
https://doi.org/10.3390/molecules31040593
Primary Topic
Gout, Hyperuricemia, Uric Acid
Type
article
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0.00
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article

Structure-Based Virtual Screening of Plant-Derived Flavonoids as Putative GLUT9 Binders with Antioxidant Properties

Kevser Kübra Kırboğa, Mithun Rudrapal, Emre Aktaş, Ecir Uğur Küçüksille
Molecules
Gout, Hyperuricemia, Uric Acid
article

Structure-Based Virtual Screening of Plant-Derived Flavonoids as Putative GLUT9 Binders with Antioxidant Properties

Kevser Kübra Kırboğa, Mithun Rudrapal, Emre Aktaş, Ecir Uğur Küçüksille
article en

Abstract

Hyperuricemia affects approximately 20% of the global adult population and serves as the primary etiological factor for gout. Glucose transporter 9 (GLUT9) plays a critical role in renal urate reabsorption, representing a promising therapeutic target for hyperuricemia treatment. This study employed an integrated computational and experimental approach to identify novel flavonoid-based putative GLUT9 binders, combining molecular docking, molecular dynamics (MD) simulations, ADMET prediction, antioxidant evaluation, and density functional theory (DFT) calculations. Eight structurally diverse flavonoids were docked against the human GLUT9 cryo-EM structure, and antioxidant activities were assessed using DPPH, ABTS, and FRAP assays. All tested flavonoids exhibited favorable binding affinities ranging from -7.67 to -9.10 kcal/mol. Epigallocatechin gallate (EGCG) demonstrated the highest binding affinity (-9.10 kcal/mol) with an extensive hydrogen bonding network, while chrysin exhibited the second-highest affinity (-8.35 kcal/mol) with favorable drug-like properties. MD simulations over 100 ns confirmed the structural stability of the complexes. EGCG displayed exceptional antioxidant capacity (DPPH IC<sub>50</sub> = 3.28 μM) superior to ascorbic acid, whereas chrysin showed lower radical scavenging activity despite favorable GLUT9 binding. DFT calculations revealed that higher HOMO energies correlated with enhanced antioxidant activity. These findings suggest that EGCG and chrysin exhibit favorable GLUT9 binding profiles, warranting further functional and pharmacokinetic optimization.

MoleculesVol. 31(4)
Vignan's Foundation for Science, Technology & Research (IN), Bilecik Şeyh Edebali Üniversitesi (TR), Süleyman Demirel Üniversitesi (TR), Suleyman Demirel University (KZ), Istanbul Technical University (TR)
Openalex Percentile: Top 67%
Gout, Hyperuricemia, Uric Acid
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Structure-Based Virtual Screening of Plant-Derived Flavonoids as Putative GLUT9 Binders with Antioxidant Properties — Kevser Kübra Kırboğa, Mithun Rudrapal, et al. · Molecules (2026) | TGRS Research Map | TGRS