<scp> segcsvd <sub>PVS</sub> </scp> : A Convolutional Neural Network‐Based Tool for Quantification of Enlarged Perivascular Spaces ( <scp>PVS</scp> ) on <scp> T <sub>1</sub> </scp> ‐Weighted Images

Enlarged perivascular spaces (PVS) are imaging markers of cerebral small vessel disease (CSVD) that are associated with age, disease phenotypes, and overall health. Quantification of PVS is challenging but necessary to expand an understanding of their role in cerebrovascular pathology. Accurate and automated segmentation of PVS on T<sub>1</sub>-weighted images would be valuable given the widespread use of T<sub>1</sub>-weighted imaging protocols in multisite clinical and research datasets. We introduce segcsvd<sub>PVS</sub>, a convolutional neural network (CNN)-based tool for automated PVS segmentation on T<sub>1</sub>-weighted images. segcsvd<sub>PVS</sub> was developed using a novel hierarchical approach that builds on existing tools and incorporates robust training strategies to enhance the accuracy and consistency of PVS segmentation. Performance was evaluated using a comprehensive evaluation strategy that included comparison to existing benchmark methods, ablation-based validation, accuracy validation against manual ground truth annotations, correlation with age-related PVS burden as a biological benchmark, and extensive robustness testing. segcsvd<sub>PVS</sub> achieved strong object-level performance for basal ganglia PVS (DSC = 0.78), exhibiting both high sensitivity (SNS = 0.80) and precision (PRC = 0.78). Although voxel-level precision was lower (PRC = 0.57), manual correction improved this by only ~3%, indicating that the additional voxels reflected primary boundary- or extent-related differences rather than correctable false positive error. For non-basal ganglia PVS, segcsvd<sub>PVS</sub> outperformed benchmark methods, exhibiting higher voxel-level performance across several metrics (DSC = 0.60, SNS = 0.67, PRC = 0.57, NSD = 0.77), despite overall lower performance relative to basal ganglia PVS. Additionally, the association between age and segmentation-derived measures of PVS burden was consistently stronger and more reliable for segcsvd<sub>PVS</sub> compared to benchmark methods across three cohorts (test6, ADNI, CAHHM), providing further evidence of the accuracy and consistency of its segmentation output. segcsvd<sub>PVS</sub> demonstrates robust performance across diverse imaging conditions and improved sensitivity to biologically meaningful associations, supporting its utility as a T<sub>1</sub>-based PVS segmentation tool.

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Publication Details

Journal
Human Brain Mapping
Published
2026-02-01
DOI
https://doi.org/10.1002/hbm.70462
Primary Topic
Cerebrospinal fluid and hydrocephalus
Type
article
Field-Weighted Citation Impact
0.00
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article

segcsvd PVS : A Convolutional Neural Network‐Based Tool for Quantification of Enlarged Perivascular Spaces ( PVS ) on T 1 ‐Weighted Images

Vanessa Yhap, Erin Gibson, Malcolm Binns, Stephanie Berberian et al.
Human Brain Mapping
Cerebrospinal fluid and hydrocephalus
article

segcsvd PVS : A Convolutional Neural Network‐Based Tool for Quantification of Enlarged Perivascular Spaces ( PVS ) on T 1 ‐Weighted Images

Vanessa Yhap, Erin Gibson, Malcolm Binns, Stephanie Berberian, Roberto Duarte Coello, Robert Edward Bartha, Lauren Abby Woods, Sanjeev Kumar, Maged Goubran, Joel Ramirez, Julie Ottoy, Sean Symons, Mario Masellis, R Swartz, J Wardlaw, Andrew S. P. Lim, Navneet Singh, Carmela M. Tartaglia, Christopher J. M. Scott, Fuqiang Gao, Bradley J. MacIntosh, Anthony E. Lang, Sandra E. Black
article en

Abstract

Enlarged perivascular spaces (PVS) are imaging markers of cerebral small vessel disease (CSVD) that are associated with age, disease phenotypes, and overall health. Quantification of PVS is challenging but necessary to expand an understanding of their role in cerebrovascular pathology. Accurate and automated segmentation of PVS on T<sub>1</sub>-weighted images would be valuable given the widespread use of T<sub>1</sub>-weighted imaging protocols in multisite clinical and research datasets. We introduce segcsvd<sub>PVS</sub>, a convolutional neural network (CNN)-based tool for automated PVS segmentation on T<sub>1</sub>-weighted images. segcsvd<sub>PVS</sub> was developed using a novel hierarchical approach that builds on existing tools and incorporates robust training strategies to enhance the accuracy and consistency of PVS segmentation. Performance was evaluated using a comprehensive evaluation strategy that included comparison to existing benchmark methods, ablation-based validation, accuracy validation against manual ground truth annotations, correlation with age-related PVS burden as a biological benchmark, and extensive robustness testing. segcsvd<sub>PVS</sub> achieved strong object-level performance for basal ganglia PVS (DSC = 0.78), exhibiting both high sensitivity (SNS = 0.80) and precision (PRC = 0.78). Although voxel-level precision was lower (PRC = 0.57), manual correction improved this by only ~3%, indicating that the additional voxels reflected primary boundary- or extent-related differences rather than correctable false positive error. For non-basal ganglia PVS, segcsvd<sub>PVS</sub> outperformed benchmark methods, exhibiting higher voxel-level performance across several metrics (DSC = 0.60, SNS = 0.67, PRC = 0.57, NSD = 0.77), despite overall lower performance relative to basal ganglia PVS. Additionally, the association between age and segmentation-derived measures of PVS burden was consistently stronger and more reliable for segcsvd<sub>PVS</sub> compared to benchmark methods across three cohorts (test6, ADNI, CAHHM), providing further evidence of the accuracy and consistency of its segmentation output. segcsvd<sub>PVS</sub> demonstrates robust performance across diverse imaging conditions and improved sensitivity to biologically meaningful associations, supporting its utility as a T<sub>1</sub>-based PVS segmentation tool.

Human Brain MappingVol. 47(2)
Western University (CA), Oslo University Hospital (NO), Sunnybrook Health Science Centre (CA), University Health Network (CA), Centre for Addiction and Mental Health (CA), University of Toronto (CA), Toronto Western Hospital (CA), Scarborough Health Network (CA), Baycrest Hospital (CA), Public Health Ontario (CA), UK Dementia Research Institute (GB), Ontario Brain Institute (CA), University of Edinburgh (GB)
Openalex Percentile: Top 67%
Cerebrospinal fluid and hydrocephalus
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