Methyl group dynamics and conformational flexibility in methacetin revealed by neutron spectroscopy

• Neutron spectroscopy shows that the reorientational motions of the methyl groups in methacetin are highly sensitive to both temperature and pressure. • Analysis of the mean square displacement (MSD) reveals a clear deviation from the harmonic Debye model above 140-200 K. • DFT calculations demonstrate that in the crystalline state, methyl torsions are strongly coupled. • Quasi-elastic neutron scattering reveals that reorientational motion on the picosecond timescale is dominated by the O-CH₃ group. • Mixed C-CH₃ modes soften above 0.4 GPa, indicating reduced flexibility and increased rigidity under pressure. • Methacetin’s dynamic behaviour, influenced by subtle structural changes, highlights the importance of methyl group dynamics in pharmaceutical compounds. The dynamics of functional groups within drug molecules influences their medicinal or toxicological effects, with methyl groups’ conformational changes affecting binding to active sites. Here, we combine inelastic neutron scattering spectroscopy with density functional theory to investigate molecular dynamics and conformational flexibility of methacetin (C 9 H 11 NO 2 ), a member of the acetamide family that includes paracetamol (C 8 H 9 NO 2 ) and phenacetin (C 10 H 13 NO 2 ). Our results reveal that subtle variations in its crystal packing and hydrogen bonding lead to multiple conformations, with methyl group reorientations contributing significantly to the molecule’s dynamics. This study stresses the importance of integrating experimental and computational methods to understand the structural dynamics of pharmaceutical compounds and their implications for drug design.

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Publication Details

Journal
Journal of Molecular Structure
Published
2026-02-05
DOI
https://doi.org/10.1016/j.molstruc.2026.145589
Primary Topic
Crystallography and molecular interactions
Type
article
Field-Weighted Citation Impact
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article

Methyl group dynamics and conformational flexibility in methacetin revealed by neutron spectroscopy

Tilo Seydel, Michael Marek Koza, Svemir Rudić, E. Boldyreva et al.
Journal of Molecular Structure
Crystallography and molecular interactions
article

Methyl group dynamics and conformational flexibility in methacetin revealed by neutron spectroscopy

Tilo Seydel, Michael Marek Koza, Svemir Rudić, E. Boldyreva, Heloisa N. Bordallo, Hery Mitsutake, Juergen Eckert, Jose E.M. Pereira, Boris A. Zakharov
article en

Abstract

• Neutron spectroscopy shows that the reorientational motions of the methyl groups in methacetin are highly sensitive to both temperature and pressure. • Analysis of the mean square displacement (MSD) reveals a clear deviation from the harmonic Debye model above 140-200 K. • DFT calculations demonstrate that in the crystalline state, methyl torsions are strongly coupled. • Quasi-elastic neutron scattering reveals that reorientational motion on the picosecond timescale is dominated by the O-CH₃ group. • Mixed C-CH₃ modes soften above 0.4 GPa, indicating reduced flexibility and increased rigidity under pressure. • Methacetin’s dynamic behaviour, influenced by subtle structural changes, highlights the importance of methyl group dynamics in pharmaceutical compounds. The dynamics of functional groups within drug molecules influences their medicinal or toxicological effects, with methyl groups’ conformational changes affecting binding to active sites. Here, we combine inelastic neutron scattering spectroscopy with density functional theory to investigate molecular dynamics and conformational flexibility of methacetin (C 9 H 11 NO 2 ), a member of the acetamide family that includes paracetamol (C 8 H 9 NO 2 ) and phenacetin (C 10 H 13 NO 2 ). Our results reveal that subtle variations in its crystal packing and hydrogen bonding lead to multiple conformations, with methyl group reorientations contributing significantly to the molecule’s dynamics. This study stresses the importance of integrating experimental and computational methods to understand the structural dynamics of pharmaceutical compounds and their implications for drug design.

Journal of Molecular StructureVol. 1360
Texas Tech University (US), University of Copenhagen (DK), Rutherford Appleton Laboratory (GB), Novosibirsk State University (RU), Institut Laue-Langevin (FR), ESS Bilbao (ES)
Openalex Percentile: Top 64%
Crystallography and molecular interactions
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