Evaluation of the Performance of Novel Gram-Negative and Gram-Positive Sepsis Panels for the Rapid Diagnosis of Bloodstream Infections

<b>Background/Objectives:</b> Bloodstream infections (BSIs) are a global healthcare issue associated with high mortality rates. Rapid diagnosis is of importance for the early selection of targeted therapy to improve patient outcomes. The use of rapid molecular assays with positive blood culture (BC) allows the identification (ID) of pathogens and the most relevant resistance determinants (RDs) in a shorter turnaround time, compared to standard culture. In this study, the performances of a new syndromic panel to determine the IDs and RDs of Gram-negative (GN) and Gram-positive (GP) bacteria were investigated in comparison with a standard-of-care (SoC) workflow. <b>Methods:</b> Two hospitals processed residual positive BC samples from non-replicated patients using Molecular Mouse (MM) Sepsis panels (Alifax, Padova, Italy) for GP ID, GN ID and RD detection. Results were compared with an SOC workflow based on subculture, ID by MALDI-ToF mass spectrometry, phenotypic antibiogram, and real-time PCRs for RDs from isolated colonies. <b>Results:</b> A total of 140 and 136 residual positive BC samples were found to be valid for MM-ID and RD, respectively, yielding 76 GN and 76 GP species. Overall ID agreement at the species level was 136/152 (89%). RD agreement was 144/146 (99%). Regarding GN and GP species, ID agreement was 68/76 (89%) and 70/76 (92%), respectively. <b>Conclusions:</b> MM showed high sensitivity in RD detection; however, some discrepancies with results of the SoC workflow were observed, represented by reduced sensitivity for some species-specific IDs. Panel size and compact instrument dimension can be seen as the principal advantage of this modular molecular assay for the rapid detection of pathogens responsible for BSIs.

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Journal
Diagnostics
Published
2026-02-05
DOI
https://doi.org/10.3390/diagnostics16030481
Primary Topic
Bacterial Identification and Susceptibility Testing
Type
article
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article

Evaluation of the Performance of Novel Gram-Negative and Gram-Positive Sepsis Panels for the Rapid Diagnosis of Bloodstream Infections

Marco Coppi, Alberto Antonelli, Chiara Chilleri, Iolanda Montenora et al.
Diagnostics
Bacterial Identification and Susceptibility Testing
article

Evaluation of the Performance of Novel Gram-Negative and Gram-Positive Sepsis Panels for the Rapid Diagnosis of Bloodstream Infections

Marco Coppi, Alberto Antonelli, Chiara Chilleri, Iolanda Montenora, Sara Salvetti, Gian Maria Rossolini, Tommaso Giani
article en

Abstract

<b>Background/Objectives:</b> Bloodstream infections (BSIs) are a global healthcare issue associated with high mortality rates. Rapid diagnosis is of importance for the early selection of targeted therapy to improve patient outcomes. The use of rapid molecular assays with positive blood culture (BC) allows the identification (ID) of pathogens and the most relevant resistance determinants (RDs) in a shorter turnaround time, compared to standard culture. In this study, the performances of a new syndromic panel to determine the IDs and RDs of Gram-negative (GN) and Gram-positive (GP) bacteria were investigated in comparison with a standard-of-care (SoC) workflow. <b>Methods:</b> Two hospitals processed residual positive BC samples from non-replicated patients using Molecular Mouse (MM) Sepsis panels (Alifax, Padova, Italy) for GP ID, GN ID and RD detection. Results were compared with an SOC workflow based on subculture, ID by MALDI-ToF mass spectrometry, phenotypic antibiogram, and real-time PCRs for RDs from isolated colonies. <b>Results:</b> A total of 140 and 136 residual positive BC samples were found to be valid for MM-ID and RD, respectively, yielding 76 GN and 76 GP species. Overall ID agreement at the species level was 136/152 (89%). RD agreement was 144/146 (99%). Regarding GN and GP species, ID agreement was 68/76 (89%) and 70/76 (92%), respectively. <b>Conclusions:</b> MM showed high sensitivity in RD detection; however, some discrepancies with results of the SoC workflow were observed, represented by reduced sensitivity for some species-specific IDs. Panel size and compact instrument dimension can be seen as the principal advantage of this modular molecular assay for the rapid detection of pathogens responsible for BSIs.

DiagnosticsVol. 16(3)
Marconi University (IT), Ospedale San Giuseppe (IT), University of Florence (IT)
Good health and well-being
Openalex Percentile: Top 63%
Bacterial Identification and Susceptibility Testing
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