Modernizing biomolecular NMR: The POKY suite

Biomolecular NMR spectroscopy has been a keystone in structural biology for decades. It can provide unique, atomic-level insights into protein dynamics, interactions, and conformational ensembles. However, its complex workflows and fragmented data analysis pipelines are often perceived as significant barriers to entry. This review highlights the POKY suite as a comprehensive solution that modernizes and streamlines the entire biomolecular NMR process. From spectral processing to structure calculation, POKY creates a single user-friendly cyber infrastructure for a seamless and efficient NMR data analysis environment. A key aspect of its design is the integration of various artificial intelligence components to streamline complex tasks and reduce user burden, such as automation, unsupervised learning, and more. While recent advances within in silico artificial intelligence prediction models have raised questions about the role of experimental data, POKY provides a clear answer. This ecosystem can create a powerful synergy between the experimental data with structure prediction. Modernizing the experimental workflow, POKY makes NMR more accessible and powerful, reinforcing its vital role in structural biology.

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Publication Details

Journal
Journal of Biological Chemistry
Published
2026-02-05
DOI
https://doi.org/10.1016/j.jbc.2026.111246
Primary Topic
Protein Structure and Dynamics
Type
article
Field-Weighted Citation Impact
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article

Modernizing biomolecular NMR: The POKY suite

Abigail Chiu, Woonghee Lee
Journal of Biological Chemistry
Protein Structure and Dynamics
article

Modernizing biomolecular NMR: The POKY suite

Abigail Chiu, Woonghee Lee
article en

Abstract

Biomolecular NMR spectroscopy has been a keystone in structural biology for decades. It can provide unique, atomic-level insights into protein dynamics, interactions, and conformational ensembles. However, its complex workflows and fragmented data analysis pipelines are often perceived as significant barriers to entry. This review highlights the POKY suite as a comprehensive solution that modernizes and streamlines the entire biomolecular NMR process. From spectral processing to structure calculation, POKY creates a single user-friendly cyber infrastructure for a seamless and efficient NMR data analysis environment. A key aspect of its design is the integration of various artificial intelligence components to streamline complex tasks and reduce user burden, such as automation, unsupervised learning, and more. While recent advances within in silico artificial intelligence prediction models have raised questions about the role of experimental data, POKY provides a clear answer. This ecosystem can create a powerful synergy between the experimental data with structure prediction. Modernizing the experimental workflow, POKY makes NMR more accessible and powerful, reinforcing its vital role in structural biology.

Journal of Biological ChemistryVol. 302(3)
University of Colorado Denver (US)
Life below water
Openalex Percentile: Top 67%
Protein Structure and Dynamics
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