Coding and non-coding RNA sequencing during Thalassiosira gravida resting cell formation

Diatoms are abundant unicellular microalgae that play a fundamental role in global aquatic ecosystems, producing bioactive secondary metabolites with different functions, from signalling to defence. They exhibit complex life cycles comprising distinct phases: active growth, quiescence state in some species (with the formation of spores or resting cells), and sexual reproduction. The transition to the quiescent state permits long-term persistence, allowing species to survive under unfavourable environmental conditions. Nevertheless, the molecular mechanisms governing the switch between growth and quiescent state remain largely unknown. Here, we present the first multi-timepoint sequencing of coding and non-coding RNAs during the formation of resting cells, induced by nitrogen depletion, in the marine diatom Thalassiosira gravida (valid name of Thalassiosira rotula). This dataset provides new omics data associated with the initiation and maintenance of the quiescent state, supporting further investigation of its underlying molecular pathways.

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Publication Details

Journal
Scientific Data
Published
2026-02-05
DOI
https://doi.org/10.1038/s41597-026-06744-z
Primary Topic
Algal biology and biofuel production
Type
article
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Coding and non-coding RNA sequencing during Thalassiosira gravida resting cell formation

Marina Montresor, Rosa Maria Sepe, Marco Di Marsico, Valeria Di Dato et al.
Scientific Data
Algal biology and biofuel production
article

Coding and non-coding RNA sequencing during Thalassiosira gravida resting cell formation

Marina Montresor, Rosa Maria Sepe, Marco Di Marsico, Valeria Di Dato, Ida Orefice, Giovanna Romano
article en

Abstract

Diatoms are abundant unicellular microalgae that play a fundamental role in global aquatic ecosystems, producing bioactive secondary metabolites with different functions, from signalling to defence. They exhibit complex life cycles comprising distinct phases: active growth, quiescence state in some species (with the formation of spores or resting cells), and sexual reproduction. The transition to the quiescent state permits long-term persistence, allowing species to survive under unfavourable environmental conditions. Nevertheless, the molecular mechanisms governing the switch between growth and quiescent state remain largely unknown. Here, we present the first multi-timepoint sequencing of coding and non-coding RNAs during the formation of resting cells, induced by nitrogen depletion, in the marine diatom Thalassiosira gravida (valid name of Thalassiosira rotula). This dataset provides new omics data associated with the initiation and maintenance of the quiescent state, supporting further investigation of its underlying molecular pathways.

Scientific DataVol. 13(1)
SOM Biotech (Spain) (ES), Stazione Zoologica Anton Dohrn (IT)
Life below water
Openalex Percentile: Top 68%
Algal biology and biofuel production
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