Taxonomic characterization of Thaumasiovibrio clandestinus sp. nov., isolated from marine mud in Gochang and emended description of the genus Thaumasiovibrio

A phylogenetically distinct bacterial strain, designated as DFM-14<sup>T</sup>, was isolated in 2022 from marine mud collected in Gochang, Jeollabuk-do, South Korea, and characterized using a polyphasic taxonomic approach. The isolate is Gram-stain-negative, motile, pale white and coccoid-shaped, typically forming clusters. It is facultatively aerobic, and phylogenetic analysis of the 16S rRNA gene placed it within the genus <i>Thaumasiovibrio</i> (family <i>Vibrionaceae</i>, phylum <i>Pseudomonadota</i>). Strain DFM-14<sup>T</sup> formed a distinct clade with <i>Thaumasiovibrio subtropicus</i> C4V358<sup>T</sup> and <i>Thaumasiovibrio occultus</i> C4II189ᵀ, sharing 16S rRNA gene sequence similarities of 95.6% and 95.2%, respectively. The major fatty acids are C<sub>12 : 0</sub>, C<sub>12 : 0</sub> 3-OH, C<sub>16 : 0</sub>, C<sub>16 : 1</sub> <i> ω</i>9c and C<sub>18 : 1</sub> <i> ω</i>9c, while the predominant polar lipids are diphosphatidylglycerol, phosphatidylglycerol and glycolipids. The draft genome is 4.4 Mb in size, assembled into 56 contigs, and contains 4,445 coding sequences and 110 RNAs (8 rRNAs and 102 tRNAs), with a G+C content of 45.4 mol%. Optimal growth occurs at 25 °C, pH 7.0 and 2% (w/v) NaCl. Based on phenotypic, phylogenetic, chemotaxonomic and genomic evidence, strain DFM-14ᵀ represents a novel species of the genus <i>Thaumasiovibrio</i>, for which the name <i>Thaumasiovibrio clandestinus</i> sp. nov. is proposed. The type strain is DFM-14<sup>T</sup> (=KEMB 24352<sup>T</sup>=JCM 37837<sup>T</sup>=KCTC 8887<sup>T</sup>).

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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2026-02-04
DOI
https://doi.org/10.1099/ijsem.0.007053
Primary Topic
Genomics and Phylogenetic Studies
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article
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article

Taxonomic characterization of Thaumasiovibrio clandestinus sp. nov., isolated from marine mud in Gochang and emended description of the genus Thaumasiovibrio

Sang-Seob LEE, Shahzadi Raheela Anum, Sathiyaraj Srinivasan, Suk-Chan Lee
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
article

Taxonomic characterization of Thaumasiovibrio clandestinus sp. nov., isolated from marine mud in Gochang and emended description of the genus Thaumasiovibrio

Sang-Seob LEE, Shahzadi Raheela Anum, Sathiyaraj Srinivasan, Suk-Chan Lee
article en

Abstract

A phylogenetically distinct bacterial strain, designated as DFM-14<sup>T</sup>, was isolated in 2022 from marine mud collected in Gochang, Jeollabuk-do, South Korea, and characterized using a polyphasic taxonomic approach. The isolate is Gram-stain-negative, motile, pale white and coccoid-shaped, typically forming clusters. It is facultatively aerobic, and phylogenetic analysis of the 16S rRNA gene placed it within the genus <i>Thaumasiovibrio</i> (family <i>Vibrionaceae</i>, phylum <i>Pseudomonadota</i>). Strain DFM-14<sup>T</sup> formed a distinct clade with <i>Thaumasiovibrio subtropicus</i> C4V358<sup>T</sup> and <i>Thaumasiovibrio occultus</i> C4II189ᵀ, sharing 16S rRNA gene sequence similarities of 95.6% and 95.2%, respectively. The major fatty acids are C<sub>12 : 0</sub>, C<sub>12 : 0</sub> 3-OH, C<sub>16 : 0</sub>, C<sub>16 : 1</sub> <i> ω</i>9c and C<sub>18 : 1</sub> <i> ω</i>9c, while the predominant polar lipids are diphosphatidylglycerol, phosphatidylglycerol and glycolipids. The draft genome is 4.4 Mb in size, assembled into 56 contigs, and contains 4,445 coding sequences and 110 RNAs (8 rRNAs and 102 tRNAs), with a G+C content of 45.4 mol%. Optimal growth occurs at 25 °C, pH 7.0 and 2% (w/v) NaCl. Based on phenotypic, phylogenetic, chemotaxonomic and genomic evidence, strain DFM-14ᵀ represents a novel species of the genus <i>Thaumasiovibrio</i>, for which the name <i>Thaumasiovibrio clandestinus</i> sp. nov. is proposed. The type strain is DFM-14<sup>T</sup> (=KEMB 24352<sup>T</sup>=JCM 37837<sup>T</sup>=KCTC 8887<sup>T</sup>).

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 76(2)
Sungkyunkwan University (KR), Seoul Women's University (KR)
Life below water
Openalex Percentile: Top 67%
Genomics and Phylogenetic Studies
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Taxonomic characterization of Thaumasiovibrio clandestinus sp. nov., isolated from marine mud in Gochang and emended description of the genus Thaumasiovibrio — Sang-Seob LEE, Shahzadi Raheela Anum, et al. · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2026) | TGRS Research Map | TGRS