From collection to analysis: Developing data pipelines for imaging FlowCytobot to support ecological monitoring in the waters of Alaska

Phytoplankton are key to ocean ecosystem production and global carbon cycling. The Imaging FlowCytobot (IFCB) allows for monitoring of these microscopic organisms by capturing detailed images of plankton particles in water samples.

Authors

Publication Details

Journal
National Oceanic and Atmospheric Administration (NOAA) - NOAA Central Library
Published
2026-02-04
DOI
https://doi.org/10.25923/fwpq-my83
Primary Topic
Marine and coastal ecosystems
Type
article
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article

From collection to analysis: Developing data pipelines for imaging FlowCytobot to support ecological monitoring in the waters of Alaska

J. M. Nielsen, G. Kurtay, V. Staneva, J. C. Gann et al.
National Oceanic and Atmospheric Administration (NOAA) - NOAA Central Library
Marine and coastal ecosystems
article

From collection to analysis: Developing data pipelines for imaging FlowCytobot to support ecological monitoring in the waters of Alaska

J. M. Nielsen, G. Kurtay, V. Staneva, J. C. Gann, H. Tabisola, C. W. Mordy
article en

Abstract

Phytoplankton are key to ocean ecosystem production and global carbon cycling. The Imaging FlowCytobot (IFCB) allows for monitoring of these microscopic organisms by capturing detailed images of plankton particles in water samples.

National Oceanic and Atmospheric Administration (NOAA) - NOAA Central Library
Life below water
Openalex Percentile: Top 70%
Marine and coastal ecosystems
DOIOpen Access PDFOpenAlex
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From collection to analysis: Developing data pipelines for imaging FlowCytobot to support ecological monitoring in the waters of Alaska — J. M. Nielsen, G. Kurtay, et al. · National Oceanic and Atmospheric Administration (NOAA) - NOAA Central Library (2026) | TGRS Research Map | TGRS