Context-dependent adaptation in structured environments

Adaptive evolution often leads to niche specialization, but successful colonization of a new niche can depend as much on ecological context as on genetic change. This is especially true in spatially structured environments, where the construction of habitat and order of arrival of mutants shape evolutionary outcomes. In static broth cultures, the air-liquid interface (ALI) provides a high-oxygen niche typically colonized by mat-forming strategists. In Pseudomonas fluorescens, single mutations that upregulate cellulose production give rise to 'wrinkly spreader' (WS) types-canonical niche specialists that out-compete ancestral types at the ALI. Here, we show that this view can be refined: WS mutants often fail to establish when introduced alone at low density, but co-culture with ancestral types rescues colonization. Microscopy and simulations reveal that ancestral types physically scaffold the ALI, enabling attachment and facilitating the in situ emergence of diverse WS mutants. Ancestral types later disperse, allowing WS expansion. This transient asymmetric interaction shows that even strongly adaptive mutations may rely on ecological facilitation. More broadly, our findings highlight the reciprocal links between ecology and evolution, revealing how transient ecological dependencies can shape adaptive trajectories.

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Publication Details

Journal
Proceedings of the Royal Society B Biological Sciences
Published
2026-02-04
DOI
https://doi.org/10.1098/rspb.2025.2004
Primary Topic
Evolution and Genetic Dynamics
Type
article
Field-Weighted Citation Impact
0.00

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article

Context-dependent adaptation in structured environments

Yuya Karita, Elisa Brambilla, Paul B Rainey, J. Carlos R. Hernandez-Beltran et al.
Proceedings of the Royal Society B Biological Sciences
Evolution and Genetic Dynamics
article

Context-dependent adaptation in structured environments

Yuya Karita, Elisa Brambilla, Paul B Rainey, J. Carlos R. Hernandez-Beltran, Michael Schwarz, Gisela T. Rodríguez-Sánchez
article en

Abstract

Adaptive evolution often leads to niche specialization, but successful colonization of a new niche can depend as much on ecological context as on genetic change. This is especially true in spatially structured environments, where the construction of habitat and order of arrival of mutants shape evolutionary outcomes. In static broth cultures, the air-liquid interface (ALI) provides a high-oxygen niche typically colonized by mat-forming strategists. In Pseudomonas fluorescens, single mutations that upregulate cellulose production give rise to 'wrinkly spreader' (WS) types-canonical niche specialists that out-compete ancestral types at the ALI. Here, we show that this view can be refined: WS mutants often fail to establish when introduced alone at low density, but co-culture with ancestral types rescues colonization. Microscopy and simulations reveal that ancestral types physically scaffold the ALI, enabling attachment and facilitating the in situ emergence of diverse WS mutants. Ancestral types later disperse, allowing WS expansion. This transient asymmetric interaction shows that even strongly adaptive mutations may rely on ecological facilitation. More broadly, our findings highlight the reciprocal links between ecology and evolution, revealing how transient ecological dependencies can shape adaptive trajectories.

Proceedings of the Royal Society B Biological SciencesVol. 293(2064)
University of Tokyo Hospital (JP), Max Planck Institute for Evolutionary Anthropology (DE), Max Planck Institute for Evolutionary Biology (DE), The University of Tokyo (JP), ESPCI Paris (FR)
Max-Planck-Gesellschaft
Life in Land
Openalex Percentile: Top 64%
Evolution and Genetic Dynamics
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Context-dependent adaptation in structured environments — Yuya Karita, Elisa Brambilla, et al. · Proceedings of the Royal Society B Biological Sciences (2026) | TGRS Research Map | TGRS