The impact of fine-tuning on entity resolution: An experimental evaluation

Fine-tuning pre-trained language models has become the state-of-the-art approach for Entity Resolution (ER), but this has created a divide between two dominant architectures: fast-but-less-accurate bi-encoders and accurate-but-slow cross-encoders. However, a concrete gap in prior ER benchmarking remains unresolved: existing studies often evaluate architectures in isolation or on limited datasets. It remains unclear which base models and architectures are best suited for the diverse range of real-world ER datasets, each with unique characteristics and performance bottlenecks. This paper bridges this gap through an extensive empirical evaluation. We systematically compare three popular pre-trained models (MiniLM, MPNet, and BGE) across three distinct architectural paradigms: a pre-trained bi-encoder, a fine-tuned bi-encoder, and a fine-tuned cross-encoder. We tested these combinations on eight diverse real-world and semi-synthetic datasets, analyzing their performance, training costs, and final resolution times. Our results reveal a clear accuracy-vs-efficiency trade-off, identifying the fine-tuned bi-encoder as the optimal balance between performance and practical resolution speed. More importantly, we demonstrate that fine-tuning is not a universal solution. Its effectiveness is highly contingent on the dataset: it provides substantial gains on specialized domains by fixing pre-existing performance gaps but is detrimental to performance on datasets where pre-trained models are already well-aligned. These findings provide a practical guide for practitioners on selecting the optimal model and architecture based on their specific data and application requirements.

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Publication Details

Journal
Knowledge-Based Systems
Published
2026-02-03
DOI
https://doi.org/10.1016/j.knosys.2026.115427
Primary Topic
Data Quality and Management
Type
article
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article

The impact of fine-tuning on entity resolution: An experimental evaluation

Leonidas Akritidis, Panayiotis Bozanis, Dimitrios Karapiperis
Knowledge-Based Systems
Data Quality and Management
article

The impact of fine-tuning on entity resolution: An experimental evaluation

Leonidas Akritidis, Panayiotis Bozanis, Dimitrios Karapiperis
article en

Abstract

Fine-tuning pre-trained language models has become the state-of-the-art approach for Entity Resolution (ER), but this has created a divide between two dominant architectures: fast-but-less-accurate bi-encoders and accurate-but-slow cross-encoders. However, a concrete gap in prior ER benchmarking remains unresolved: existing studies often evaluate architectures in isolation or on limited datasets. It remains unclear which base models and architectures are best suited for the diverse range of real-world ER datasets, each with unique characteristics and performance bottlenecks. This paper bridges this gap through an extensive empirical evaluation. We systematically compare three popular pre-trained models (MiniLM, MPNet, and BGE) across three distinct architectural paradigms: a pre-trained bi-encoder, a fine-tuned bi-encoder, and a fine-tuned cross-encoder. We tested these combinations on eight diverse real-world and semi-synthetic datasets, analyzing their performance, training costs, and final resolution times. Our results reveal a clear accuracy-vs-efficiency trade-off, identifying the fine-tuned bi-encoder as the optimal balance between performance and practical resolution speed. More importantly, we demonstrate that fine-tuning is not a universal solution. Its effectiveness is highly contingent on the dataset: it provides substantial gains on specialized domains by fixing pre-existing performance gaps but is detrimental to performance on datasets where pre-trained models are already well-aligned. These findings provide a practical guide for practitioners on selecting the optimal model and architecture based on their specific data and application requirements.

Knowledge-Based SystemsVol. 338
International Hellenic University (GR)
Openalex Percentile: Top 73%
Data Quality and Management
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The impact of fine-tuning on entity resolution: An experimental evaluation — Leonidas Akritidis, Panayiotis Bozanis, et al. · Knowledge-Based Systems (2026) | TGRS Research Map | TGRS