Deep Learning-Based Rapid Identification of Escherichia coli and Klebsiella pneumoniae from Chromogenic Agar Urine Cultures Using YOLOv12

This AI model enables rapid (sub-second), accurate phenotypic classification of the most common UTI pathogens directly from routine culture plates. Integration into automated systems could reduce the diagnostic timeline by approximately 18 hours, facilitating earlier targeted therapy and supporting antimicrobial stewardship. A key consideration for implementation is the model's basis in phenotypic identification, which aligns with standard laboratory workflow but requires awareness of rare chromogenic variants. The reliance on chromogenic morphology for <i>E. coli</i> ground truth has been a key limitation of the study.

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Publication Details

Journal
Risk Management and Healthcare Policy
Published
2026-02-01
DOI
https://doi.org/10.2147/rmhp.s561761
Primary Topic
Bacterial Identification and Susceptibility Testing
Type
article
Field-Weighted Citation Impact
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article

Deep Learning-Based Rapid Identification of Escherichia coli and Klebsiella pneumoniae from Chromogenic Agar Urine Cultures Using YOLOv12

Serpil Ustebay, Gulsum Kaya, Furkan Canbaz, Muhammed Mutlu et al.
Risk Management and Healthcare Policy
Bacterial Identification and Susceptibility Testing
article

Deep Learning-Based Rapid Identification of Escherichia coli and Klebsiella pneumoniae from Chromogenic Agar Urine Cultures Using YOLOv12

Serpil Ustebay, Gulsum Kaya, Furkan Canbaz, Muhammed Mutlu, Abdurrahman Sarmis
article en

Abstract

This AI model enables rapid (sub-second), accurate phenotypic classification of the most common UTI pathogens directly from routine culture plates. Integration into automated systems could reduce the diagnostic timeline by approximately 18 hours, facilitating earlier targeted therapy and supporting antimicrobial stewardship. A key consideration for implementation is the model's basis in phenotypic identification, which aligns with standard laboratory workflow but requires awareness of rare chromogenic variants. The reliance on chromogenic morphology for <i>E. coli</i> ground truth has been a key limitation of the study.

Risk Management and Healthcare PolicyVol. Volume 19
Istanbul University-Cerrahpaşa (TR), Education Training And Research (US), İstanbul Kanuni Sultan Süleyman Eğitim ve Araştırma Hastanesi (TR), Fatih Sultan Mehmet Eğitim Ve Araştırma Hastanesi (TR), Cranfield University (GB)
Openalex Percentile: Top 67%
Bacterial Identification and Susceptibility Testing
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Deep Learning-Based Rapid Identification of Escherichia coli and Klebsiella pneumoniae from Chromogenic Agar Urine Cultures Using YOLOv12 — Serpil Ustebay, Gulsum Kaya, et al. · Risk Management and Healthcare Policy (2026) | TGRS Research Map | TGRS