AADAT-Driven Metabolic Control of Malate and CoQ <sub>10</sub> Shapes Immune Evasion in Triple-Negative Breast Cancer

Compared to other subtypes of breast cancer, triple-negative breast cancers (TNBC) have fewer treatment options and exhibit a worse prognosis. Through integrated transcriptomic, metabolomic, immunohistochemical, spatial, and clinical analyses, we identify the mitochondrial enzyme, α-aminoadipate aminotransferase (AADAT) as a previously unrecognized metabolic immune checkpoint in TNBC. <i>AADAT</i> mRNA and protein were significantly upregulated in human TNBC, and high AADAT expression was associated with reduced intra-tumoral CD8<sup>+</sup> T-cell density and inferior survival. Genetic silencing of <i>AADAT</i> in orthotopic murine TNBC models curtailed primary tumor growth and distant metastasis in a CD8<sup>+</sup> T-cell-dependent manner, enhanced effector T-cell activation, and sensitized tumors to dual PD-1/CTLA-4 blockade. Mechanistically, unbiased metabolomics showed increased malate levels after <i>AADAT</i> knockdown. Additionally, 4-hydroxyphenylpyruvate, an essential precursor for coenzyme Q<sub>10</sub>(CoQ<sub>10</sub>) biosynthesis, decreased following <i>AADAT</i> knockdown, suggesting an impaired mitochondrial electron transport chain. CoQ<sub>10</sub> supplementation restored metabolic balance and reversed malate accumulation caused by <i>AADAT</i> knockdown, indicating that AADAT helps maintain CoQ<sub>10</sub>-supported redox homeostasis, thereby preventing malate buildup and export. Notably, malate addition directly boosted CD8<sup>+</sup> T-cell oxidative metabolism, increased the NAD<sup>+</sup>/NADH ratio and reactive oxygen species, and augmented TNF-α and IFN-γ production. In vivo, malate supplementation in drinking water phenocopied AADAT knockdown, restored the response to paclitaxel plus anti-PD-1 therapy in multiple independent syngeneic TNBC models with de novo or acquired resistance to immunotherapy, reduced tumor burden, and prolonged survival. In patient cohorts, higher spatially clustered intra-tumoral malate is associated with co-localization of functional CD8<sup>+</sup> T cells, decreased exhausted T-cell neighborhoods, and superior post-chemotherapy outcomes. These data position AADAT as a central metabolic orchestrator of immune escape in TNBC and nominate oral malate as a readily translatable adjuvant to reverse chemo-immunotherapy resistance in TNBC.

Authors

Institutions

Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-01-30
DOI
https://doi.org/10.64898/2026.01.28.702389
Primary Topic
Coenzyme Q10 studies and effects
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

AADAT-Driven Metabolic Control of Malate and CoQ 10 Shapes Immune Evasion in Triple-Negative Breast Cancer

Benny Abraham Kaipparettu, E. Seeley, Hugo Villanueva, Megha Chatterjee et al.
bioRxiv (Cold Spring Harbor Laboratory)
Coenzyme Q10 studies and effects
article

AADAT-Driven Metabolic Control of Malate and CoQ 10 Shapes Immune Evasion in Triple-Negative Breast Cancer

Benny Abraham Kaipparettu, E. Seeley, Hugo Villanueva, Megha Chatterjee, Franklin Gu, Yang Gao, Balasubramanyam Karanam, Badrajee Piyarathna, Mary K. McKenna, Nagi S. Chandandeep, Arundati Rao, Ahmed Elkhanany, Jaya Ruth Asirvatham, Arun Sreekumar, Carl Morrison, W Zhang, Liqun Yu, Irwin J. Kurland, Susmita Samanta, Sung Yun Jung, Angela R. Omilian, Lin Tian, YUNPING QIU, Dana Varghese, Vasanta Putluri, Sai Manohar Thota, Qian Zhu, Andrew Davis, Carolina Gutierrez, Xiang HF Zhang, Nagireddy Putluri, Lynette Ewura Esi Fordwuo, Gokul M Das, Jun Hyoung Park, Christine Ambrosone, Brian Wesley Simons
article en

Abstract

Compared to other subtypes of breast cancer, triple-negative breast cancers (TNBC) have fewer treatment options and exhibit a worse prognosis. Through integrated transcriptomic, metabolomic, immunohistochemical, spatial, and clinical analyses, we identify the mitochondrial enzyme, α-aminoadipate aminotransferase (AADAT) as a previously unrecognized metabolic immune checkpoint in TNBC. <i>AADAT</i> mRNA and protein were significantly upregulated in human TNBC, and high AADAT expression was associated with reduced intra-tumoral CD8<sup>+</sup> T-cell density and inferior survival. Genetic silencing of <i>AADAT</i> in orthotopic murine TNBC models curtailed primary tumor growth and distant metastasis in a CD8<sup>+</sup> T-cell-dependent manner, enhanced effector T-cell activation, and sensitized tumors to dual PD-1/CTLA-4 blockade. Mechanistically, unbiased metabolomics showed increased malate levels after <i>AADAT</i> knockdown. Additionally, 4-hydroxyphenylpyruvate, an essential precursor for coenzyme Q<sub>10</sub>(CoQ<sub>10</sub>) biosynthesis, decreased following <i>AADAT</i> knockdown, suggesting an impaired mitochondrial electron transport chain. CoQ<sub>10</sub> supplementation restored metabolic balance and reversed malate accumulation caused by <i>AADAT</i> knockdown, indicating that AADAT helps maintain CoQ<sub>10</sub>-supported redox homeostasis, thereby preventing malate buildup and export. Notably, malate addition directly boosted CD8<sup>+</sup> T-cell oxidative metabolism, increased the NAD<sup>+</sup>/NADH ratio and reactive oxygen species, and augmented TNF-α and IFN-γ production. In vivo, malate supplementation in drinking water phenocopied AADAT knockdown, restored the response to paclitaxel plus anti-PD-1 therapy in multiple independent syngeneic TNBC models with de novo or acquired resistance to immunotherapy, reduced tumor burden, and prolonged survival. In patient cohorts, higher spatially clustered intra-tumoral malate is associated with co-localization of functional CD8<sup>+</sup> T cells, decreased exhausted T-cell neighborhoods, and superior post-chemotherapy outcomes. These data position AADAT as a central metabolic orchestrator of immune escape in TNBC and nominate oral malate as a readily translatable adjuvant to reverse chemo-immunotherapy resistance in TNBC.

bioRxiv (Cold Spring Harbor Laboratory)
Austin College (US), Roswell Park Comprehensive Cancer Center (US), Albert Einstein College of Medicine (US), Baylor College of Medicine (US), Washington University in St. Louis (US), Baylor Scott & White Medical Center - Temple (US), Albert and Margaret Alkek Foundation (US), Texas Children's Hospital (US), Baylor Scott & White Health (US), Tuskegee University (US), The University of Texas at Austin (US), Milliken & Company (United States) (US)
Good health and well-being
Openalex Percentile: Top 72%
Coenzyme Q10 studies and effects
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.