ERGA-BGE reference genome of Xylophaga dorsalis - a common deep-sea wood-boring bivalve with Atlantic-Mediterranean distribution

<ns3:p> <ns3:italic>Xylophaga dorsalis</ns3:italic> is a common Atlantic-Mediterranean mollusc that plays a crucial role in deep-sea habitats, where it digests wood that reaches the seabed through a unique symbiosis with specialised bacteria. The reference genome of <ns3:italic>X. dorsalis</ns3:italic> thus offers a crucial resource for uncovering the genetic basis of the species adaptability to wood bore in deep-water ecosystems. The entirety of the genome sequence was assembled into 18 contiguous chromosomal pseudomolecules and 1 mitochondrial genome. This chromosome-level assembly encompasses 0.451 Gb, composed of 1,259 contigs and 320 scaffolds, with contig and scaffold N50 values of 1.30 Mb and 25.4 Mb, respectively. The genome assembly encompasses 39,720 protein-coding genes (70,084 transcripts) and 12,153 non-coding genes. </ns3:p>

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Publication Details

Journal
Open Research Europe
Published
2026-01-30
DOI
https://doi.org/10.12688/openreseurope.22692.1
Primary Topic
Genomics and Phylogenetic Studies
Type
article
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article

ERGA-BGE reference genome of Xylophaga dorsalis - a common deep-sea wood-boring bivalve with Atlantic-Mediterranean distribution

Francisco Câmara Ferreira, Thomas Marcussen, Rebekah A. Oomen, Carlota Gracia-Sancha et al.
Open Research Europe
Genomics and Phylogenetic Studies
article

ERGA-BGE reference genome of Xylophaga dorsalis - a common deep-sea wood-boring bivalve with Atlantic-Mediterranean distribution

Francisco Câmara Ferreira, Thomas Marcussen, Rebekah A. Oomen, Carlota Gracia-Sancha, Marta Ortova Gut, Astrid Bohne, Sergi Taboada, Anna Lazar, Jèssica Gómez-Garrido, Leanne Haggerty, Chiara Bortoluzzi, Torsten H. Struck, Fernando Cruz, Carles Galià-Camps, Fergal Martin, Tyler S. Alioto, Laura Aguilera, Rita Monteiro
article en

Abstract

<ns3:p> <ns3:italic>Xylophaga dorsalis</ns3:italic> is a common Atlantic-Mediterranean mollusc that plays a crucial role in deep-sea habitats, where it digests wood that reaches the seabed through a unique symbiosis with specialised bacteria. The reference genome of <ns3:italic>X. dorsalis</ns3:italic> thus offers a crucial resource for uncovering the genetic basis of the species adaptability to wood bore in deep-water ecosystems. The entirety of the genome sequence was assembled into 18 contiguous chromosomal pseudomolecules and 1 mitochondrial genome. This chromosome-level assembly encompasses 0.451 Gb, composed of 1,259 contigs and 320 scaffolds, with contig and scaffold N50 values of 1.30 Mb and 25.4 Mb, respectively. The genome assembly encompasses 39,720 protein-coding genes (70,084 transcripts) and 12,153 non-coding genes. </ns3:p>

Open Research EuropeVol. 6
Life below water
Openalex Percentile: Top 72%
Genomics and Phylogenetic Studies
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