Genome Analysis and Characterization of Formosa bonchosmolovskayae sp. nov. Isolated from Brown and Green Algae, and a Proposal to Reclassify Formosa maritima Cao et al. 2020 and Bizionia arctica Li et al. 2015 as Xanthomarina New Members

Two marine bacteria, designated strains 4Alg 33<sup>T</sup>and 3Alg 14/1, were isolated from brown (<i>Saccharina japonica</i>) and green (<i>Ulva fenestrata</i>) macroalgae, respectively. These isolates were aerobic Gram-negative rods exhibiting a gliding motility. The 16S rRNA gene phylogenetic analysis clearly showed their belonging to the genus <i>Formosa</i>, the family <i>Flavobacteriaceae</i>, and the phylum <i>Bacteroidota</i>. The closest relatives of the new strains were <i>Formosa undariae</i> KCTC 32328<sup>T</sup> (99.05%), <i>Formosa arctica</i> IMCC 9485<sup>T</sup> (99.05%) and <i>Formosa agariphila</i> KMM 3901<sup>T</sup> (98.96%). The ANI and dDDH values between the two new strains were 97.9% and 85.3%, respectively. The AAI values between 4Alg 33<sup>T</sup> and <i>Formosa</i> type strains ranged from 80.1% (<i>Formosa haliotis</i> MA1<sup>T</sup>) to 91.4% (<i>F. undariae</i> KCTC 32328<sup>T</sup>). The cellular fatty acid and polar lipid profiles of the new isolates were generally similar to those of the type strains of <i>Formosa</i> species. The genomes of 4Alg 33<sup>T</sup> and 3Alg 14/1 are represented by a circular chromosome of 4,157,724 bp and 4,316,096 bp in size with 3536 and 3879 protein-coding genes, respectively. They shared a DNA G+C content of 34.3 mol% and comprised four <i>rrn</i> operons. The pangenome of the genus <i>Formosa</i> belongs to the open type and is characterized by an abundance of CAZymes. The proportion of CAZyme genes in novel genomes was more than 5%, with a prevalence of glycoside hydrolase genes, suggesting great potential for utilizing marine-derived polysaccharides. Based on the results of polyphasic characterization, the two algal isolates represent a distinct species lineage within the genus <i>Formosa</i>, for which we propose the name <i>Formosa bonchosmolovskayae</i> sp. nov. with the type strain 4Alg 33<sup>T</sup> (= KMM 3963<sup>T</sup> = KCTC 72008<sup>T</sup>). In addition, we have proposed to transfer <i>Formosa maritima</i> Cao et al. 2020 and <i>Bizionia arctica</i> Li et al. 2015 to the genus <i>Xanthomarina</i> Vaidya et al. 2015 as <i>Xanthomarina maritima</i> comb. nov. and <i>Xanthomarina arctica</i> comb. nov. based on a combination of the genomic and phenotypic characteristics.

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Journal
Microorganisms
Published
2026-01-30
DOI
https://doi.org/10.3390/microorganisms14020328
Primary Topic
Genomics and Phylogenetic Studies
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Genome Analysis and Characterization of Formosa bonchosmolovskayae sp. nov. Isolated from Brown and Green Algae, and a Proposal to Reclassify Formosa maritima Cao et al. 2020 and Bizionia arctica Li et al. 2015 as Xanthomarina New Members

Viacheslav Eremeev, Natalia V. Zhukova, Yulia V. Savicheva, Olga Nedashkovskaya et al.
Microorganisms
Genomics and Phylogenetic Studies
article

Genome Analysis and Characterization of Formosa bonchosmolovskayae sp. nov. Isolated from Brown and Green Algae, and a Proposal to Reclassify Formosa maritima Cao et al. 2020 and Bizionia arctica Li et al. 2015 as Xanthomarina New Members

Viacheslav Eremeev, Natalia V. Zhukova, Yulia V. Savicheva, Olga Nedashkovskaya, Evgeniya Bystritskaya, Nadezhda Otstavnykh, Song-Gun Kim, Marina Isaeva, Yulia Bronnikova
article en

Abstract

Two marine bacteria, designated strains 4Alg 33<sup>T</sup>and 3Alg 14/1, were isolated from brown (<i>Saccharina japonica</i>) and green (<i>Ulva fenestrata</i>) macroalgae, respectively. These isolates were aerobic Gram-negative rods exhibiting a gliding motility. The 16S rRNA gene phylogenetic analysis clearly showed their belonging to the genus <i>Formosa</i>, the family <i>Flavobacteriaceae</i>, and the phylum <i>Bacteroidota</i>. The closest relatives of the new strains were <i>Formosa undariae</i> KCTC 32328<sup>T</sup> (99.05%), <i>Formosa arctica</i> IMCC 9485<sup>T</sup> (99.05%) and <i>Formosa agariphila</i> KMM 3901<sup>T</sup> (98.96%). The ANI and dDDH values between the two new strains were 97.9% and 85.3%, respectively. The AAI values between 4Alg 33<sup>T</sup> and <i>Formosa</i> type strains ranged from 80.1% (<i>Formosa haliotis</i> MA1<sup>T</sup>) to 91.4% (<i>F. undariae</i> KCTC 32328<sup>T</sup>). The cellular fatty acid and polar lipid profiles of the new isolates were generally similar to those of the type strains of <i>Formosa</i> species. The genomes of 4Alg 33<sup>T</sup> and 3Alg 14/1 are represented by a circular chromosome of 4,157,724 bp and 4,316,096 bp in size with 3536 and 3879 protein-coding genes, respectively. They shared a DNA G+C content of 34.3 mol% and comprised four <i>rrn</i> operons. The pangenome of the genus <i>Formosa</i> belongs to the open type and is characterized by an abundance of CAZymes. The proportion of CAZyme genes in novel genomes was more than 5%, with a prevalence of glycoside hydrolase genes, suggesting great potential for utilizing marine-derived polysaccharides. Based on the results of polyphasic characterization, the two algal isolates represent a distinct species lineage within the genus <i>Formosa</i>, for which we propose the name <i>Formosa bonchosmolovskayae</i> sp. nov. with the type strain 4Alg 33<sup>T</sup> (= KMM 3963<sup>T</sup> = KCTC 72008<sup>T</sup>). In addition, we have proposed to transfer <i>Formosa maritima</i> Cao et al. 2020 and <i>Bizionia arctica</i> Li et al. 2015 to the genus <i>Xanthomarina</i> Vaidya et al. 2015 as <i>Xanthomarina maritima</i> comb. nov. and <i>Xanthomarina arctica</i> comb. nov. based on a combination of the genomic and phenotypic characteristics.

MicroorganismsVol. 14(2)
Pacific Institute of Bioorganic Chemistry. GB Elyakova Far Eastern Branch of the Russian Academy of Sciences (RU), A.V. Zhirmunsky National Scientific Center of Marine Biology Far Eastern Branch of the Russian Academy of Sciences (RU), Korea Research Institute of Bioscience and Biotechnology (KR)
Life below water
Openalex Percentile: Top 72%
Genomics and Phylogenetic Studies
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