Breeding vegetables for whitefly resistance: past, present, and future in the AI era

Whiteflies, particularly <i>Bemisia tabaci</i>-a rapidly evolving cryptic species complex comprising more than 40 biotypes including the invasive MEAM1 and MED-and <i>Trialeurodes vaporariorum</i>, remain among the most destructive pests of global vegetable production. Their adaptability, wide host range, and efficient virus transmission drive recurrent epidemics in crops such as tomato, pepper, eggplant, cucurbits, and snapbean. Over six decades, breeding for whitefly resistance has progressed from phenotypic selection to the identification of resistance mechanisms such as antibiosis, antixenosis, and tolerance, and to the exploitation of diverse sources from wild relatives and landraces. Recent advances in QTL mapping, pangenomics, multi-omics integration, genomic selection, and CRISPR-based modification of metabolic and structural defense traits have transformed the landscape of resistance breeding. Emerging AI-enabled tools-including machine-learning models for automated whitefly phenotype detection, hyperspectral stress diagnostics, and predictive modelling of resistance loci-are accelerating the dissection and deployment of complex traits. Importantly, durable whitefly resistance enhances climate resilience by reducing dependence on insecticides, stabilizing yields under abiotic-biotic stress combinations, and mitigating climate-driven surges in whitefly populations and virus epidemics. By integrating classical genetics, modern biotechnology, multi-omics, and AI-driven decision frameworks, breeding programs can more rapidly develop robust, climate-resilient vegetable cultivars capable of withstanding evolving whitefly threats.

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Publication Details

Journal
Frontiers in Plant Science
Published
2026-01-30
DOI
https://doi.org/10.3389/fpls.2025.1724403
Primary Topic
Insect-Plant Interactions and Control
Type
article
Field-Weighted Citation Impact
0.00

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article

Breeding vegetables for whitefly resistance: past, present, and future in the AI era

Alvin M. Simmons, Rajagopalbabu Srinivasan, Saumik Basu, Sudeep Bag et al.
Frontiers in Plant Science
Insect-Plant Interactions and Control
article

Breeding vegetables for whitefly resistance: past, present, and future in the AI era

Alvin M. Simmons, Rajagopalbabu Srinivasan, Saumik Basu, Sudeep Bag, Amol N. Nankar, Derek W. Barchenger, Lotte Caarls, Bhabesh Dutta, Deepa Jaganathan, Assaf Eybishitz
article en

Abstract

Whiteflies, particularly <i>Bemisia tabaci</i>-a rapidly evolving cryptic species complex comprising more than 40 biotypes including the invasive MEAM1 and MED-and <i>Trialeurodes vaporariorum</i>, remain among the most destructive pests of global vegetable production. Their adaptability, wide host range, and efficient virus transmission drive recurrent epidemics in crops such as tomato, pepper, eggplant, cucurbits, and snapbean. Over six decades, breeding for whitefly resistance has progressed from phenotypic selection to the identification of resistance mechanisms such as antibiosis, antixenosis, and tolerance, and to the exploitation of diverse sources from wild relatives and landraces. Recent advances in QTL mapping, pangenomics, multi-omics integration, genomic selection, and CRISPR-based modification of metabolic and structural defense traits have transformed the landscape of resistance breeding. Emerging AI-enabled tools-including machine-learning models for automated whitefly phenotype detection, hyperspectral stress diagnostics, and predictive modelling of resistance loci-are accelerating the dissection and deployment of complex traits. Importantly, durable whitefly resistance enhances climate resilience by reducing dependence on insecticides, stabilizing yields under abiotic-biotic stress combinations, and mitigating climate-driven surges in whitefly populations and virus epidemics. By integrating classical genetics, modern biotechnology, multi-omics, and AI-driven decision frameworks, breeding programs can more rapidly develop robust, climate-resilient vegetable cultivars capable of withstanding evolving whitefly threats.

Frontiers in Plant ScienceVol. 16
World Vegetable Center (TW), University of Georgia (US), Graduate School Experimental Plant Sciences (NL), Carnegie Department of Plant Biology (US), Agricultural University of Georgia (GE), Institute of Plant Genetics, Polish Academy of Sciences (PL), U.S. Vegetable Laboratory (US)
U.S. Department of Agriculture, Agricultural Research Service
Climate action
Openalex Percentile: Top 75%
Insect-Plant Interactions and Control
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