Altered immune and treatment response gene expression signatures among poverty-exposed children with B-ALL
Children diagnosed with cancer typically receive standardized treatment regimens. Despite highly protocolized care, children living in poverty experience a greater risk of cancer relapse and higher mortality compared to their more affluent peers.<sup>1,2</sup> Acute lymphoblastic leukemia (ALL) is the most prevalent childhood cancer, and children with ALL exposed to poverty are more likely to experience early relapse.<sup>3</sup> Using single-cell RNA sequencing to analyze leukemic blasts and their microenvironment at diagnosis we found that poverty-exposed patients with standard-risk B-ALL exhibit transcriptional signatures of steroid resistance at time of diagnosis. Additionally, we observe increased expression of inflammatory signatures in myeloid cells and reduced effector signatures in CD8+ T-cells in children with B-ALL living in poverty. Further investigation of the mechanisms underlying these associations may identify opportunities for risk-adapted therapeutic strategies to improve disease outcomes in pediatric ALL.
Authors
- Valeriya Dimitrova (ORCID: https://orcid.org/0000-0002-8621-7301)
- Sayalee Potdar (ORCID: https://orcid.org/0000-0001-5390-1222)
- Amy Guillaumet-Adkins (ORCID: https://orcid.org/0000-0002-6772-9950)
- Monica S. Nair (ORCID: https://orcid.org/0009-0005-4972-2498)
- Andrew E. Place (ORCID: https://orcid.org/0000-0002-9604-4213)
- Marian H. Harris (ORCID: https://orcid.org/0000-0002-9956-664X)
- Birgit Knoechel
- Jens G. Lohr (ORCID: https://orcid.org/0000-0003-3486-2445)
- Julia Frede (ORCID: https://orcid.org/0000-0002-4380-9673)
- Noori Sotudeh (ORCID: https://orcid.org/0000-0002-1683-7273)
- Kira O'Neil Bona (ORCID: https://orcid.org/0000-0001-5602-7059)
- Tushara Vijaykumar
- LB Silverman
- Yana Pikman
Institutions
- Broad Institute (US)
- Boston Children's Hospital (US)
- Harvard University (US)
- Huntsman Cancer Institute (US)
- University of New Haven (US)
- Dana-Farber Cancer Institute (US)
Publication Details
- Journal
- bioRxiv (Cold Spring Harbor Laboratory)
- Published
- 2026-01-29
- DOI
- https://doi.org/10.64898/2026.01.27.702019
- Primary Topic
- Acute Lymphoblastic Leukemia research
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Bristol-Myers Squibb
- Dana-Farber/Harvard Cancer Center
- National Cancer Institute