Altered immune and treatment response gene expression signatures among poverty-exposed children with B-ALL

Children diagnosed with cancer typically receive standardized treatment regimens. Despite highly protocolized care, children living in poverty experience a greater risk of cancer relapse and higher mortality compared to their more affluent peers.<sup>1,2</sup> Acute lymphoblastic leukemia (ALL) is the most prevalent childhood cancer, and children with ALL exposed to poverty are more likely to experience early relapse.<sup>3</sup> Using single-cell RNA sequencing to analyze leukemic blasts and their microenvironment at diagnosis we found that poverty-exposed patients with standard-risk B-ALL exhibit transcriptional signatures of steroid resistance at time of diagnosis. Additionally, we observe increased expression of inflammatory signatures in myeloid cells and reduced effector signatures in CD8+ T-cells in children with B-ALL living in poverty. Further investigation of the mechanisms underlying these associations may identify opportunities for risk-adapted therapeutic strategies to improve disease outcomes in pediatric ALL.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-01-29
DOI
https://doi.org/10.64898/2026.01.27.702019
Primary Topic
Acute Lymphoblastic Leukemia research
Type
article
Field-Weighted Citation Impact
0.00

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article

Altered immune and treatment response gene expression signatures among poverty-exposed children with B-ALL

Valeriya Dimitrova, Sayalee Potdar, Amy Guillaumet-Adkins, Monica S. Nair et al.
bioRxiv (Cold Spring Harbor Laboratory)
Acute Lymphoblastic Leukemia research
article

Altered immune and treatment response gene expression signatures among poverty-exposed children with B-ALL

Valeriya Dimitrova, Sayalee Potdar, Amy Guillaumet-Adkins, Monica S. Nair, Andrew E. Place, Marian H. Harris, Birgit Knoechel, Jens G. Lohr, Julia Frede, Noori Sotudeh, Kira O'Neil Bona, Tushara Vijaykumar, LB Silverman, Yana Pikman
article en

Abstract

Children diagnosed with cancer typically receive standardized treatment regimens. Despite highly protocolized care, children living in poverty experience a greater risk of cancer relapse and higher mortality compared to their more affluent peers.<sup>1,2</sup> Acute lymphoblastic leukemia (ALL) is the most prevalent childhood cancer, and children with ALL exposed to poverty are more likely to experience early relapse.<sup>3</sup> Using single-cell RNA sequencing to analyze leukemic blasts and their microenvironment at diagnosis we found that poverty-exposed patients with standard-risk B-ALL exhibit transcriptional signatures of steroid resistance at time of diagnosis. Additionally, we observe increased expression of inflammatory signatures in myeloid cells and reduced effector signatures in CD8+ T-cells in children with B-ALL living in poverty. Further investigation of the mechanisms underlying these associations may identify opportunities for risk-adapted therapeutic strategies to improve disease outcomes in pediatric ALL.

bioRxiv (Cold Spring Harbor Laboratory)
Broad Institute (US), Boston Children's Hospital (US), Harvard University (US), Huntsman Cancer Institute (US), University of New Haven (US), Dana-Farber Cancer Institute (US)
Bristol-Myers Squibb, Dana-Farber/Harvard Cancer Center, National Cancer Institute
No poverty
Openalex Percentile: Top 74%
Acute Lymphoblastic Leukemia research
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