Chemistry of Herbarumin I, Stagonolide A, and Structurally Related Phytotoxic Ten-Membered Lactones: Oxidative Cleavage, Stereospecific Epoxidation, Transannulation, and Dimerization

Ten-membered lactones (TMLs) produced by phytopathogenic fungi are considered model compounds for the development of nature-inspired agrochemicals with novel mechanisms of action. Despite their structural simplicity, TMLs display a broad range of biological activities. Although total synthesis methods for many TMLs have been developed, systematic data on their chemical properties remain highly limited. To address this gap, we investigated the reactivity of herbarumin I, 2-<i>epi</i>-herbarumin II, stagonolides J and K, pinolidoxin, and their C-7 oxidized analogs in oxidation, hydrogenation, and isomerization reactions. We demonstrate that their spatially constrained architecture and functional group topology promote distinctive and reproducible reactivity patterns, including stereospecific epoxidation at the C5-C6 bond, mild oxidative cleavage at C7-C8, Pd/Pt-catalyzed allylic transposition, transannulation to chromone derivatives, and base-induced dimerization into fused tetrahydrofuran scaffolds. As a result, 31 new compounds were synthesized, three new reactions were discovered with mechanistic insights provided, and the absolute configuration was established for stagonolide J and stagochromene A and revised for 5,6-epoxypinolidoxin. Preliminary conclusions were drawn about the chemical lability of unsaturated C7-keto derivatives of TMLs in protic media. Such mapping of structure-reactivity relationships within this subclass of TMLs provides a foundation for future semisynthetic derivatization, chemical stability assessment, and rational expansion of biologically relevant scaffolds.

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Journal
Journal of Natural Products
Published
2026-01-29
DOI
https://doi.org/10.1021/acs.jnatprod.5c01426
Primary Topic
Synthetic Organic Chemistry Methods
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article
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article

Chemistry of Herbarumin I, Stagonolide A, and Structurally Related Phytotoxic Ten-Membered Lactones: Oxidative Cleavage, Stereospecific Epoxidation, Transannulation, and Dimerization

A. N. Fedorov, Alexander Berestetskiy, С. Н. Смирнов, Anna Dalinova et al.
Journal of Natural Products
Synthetic Organic Chemistry Methods
article

Chemistry of Herbarumin I, Stagonolide A, and Structurally Related Phytotoxic Ten-Membered Lactones: Oxidative Cleavage, Stereospecific Epoxidation, Transannulation, and Dimerization

A. N. Fedorov, Alexander Berestetskiy, С. Н. Смирнов, Anna Dalinova, Anton Slukin, A. L. Alekseeva, Valentin Radiupov, Aleksandr Zaichenko, Victor N. Khrustalev, Alexander Sikalov, Daniil Kretov
article en

Abstract

Ten-membered lactones (TMLs) produced by phytopathogenic fungi are considered model compounds for the development of nature-inspired agrochemicals with novel mechanisms of action. Despite their structural simplicity, TMLs display a broad range of biological activities. Although total synthesis methods for many TMLs have been developed, systematic data on their chemical properties remain highly limited. To address this gap, we investigated the reactivity of herbarumin I, 2-<i>epi</i>-herbarumin II, stagonolides J and K, pinolidoxin, and their C-7 oxidized analogs in oxidation, hydrogenation, and isomerization reactions. We demonstrate that their spatially constrained architecture and functional group topology promote distinctive and reproducible reactivity patterns, including stereospecific epoxidation at the C5-C6 bond, mild oxidative cleavage at C7-C8, Pd/Pt-catalyzed allylic transposition, transannulation to chromone derivatives, and base-induced dimerization into fused tetrahydrofuran scaffolds. As a result, 31 new compounds were synthesized, three new reactions were discovered with mechanistic insights provided, and the absolute configuration was established for stagonolide J and stagochromene A and revised for 5,6-epoxypinolidoxin. Preliminary conclusions were drawn about the chemical lability of unsaturated C7-keto derivatives of TMLs in protic media. Such mapping of structure-reactivity relationships within this subclass of TMLs provides a foundation for future semisynthetic derivatization, chemical stability assessment, and rational expansion of biologically relevant scaffolds.

Journal of Natural ProductsVol. 89(2)
Peoples' Friendship University of Russia (RU), St Petersburg University (RU), Peter the Great St. Petersburg Polytechnic University (RU), University of Chicago (US), N.D. Zelinsky Institute of Organic Chemistry (RU), All-Russian Institute of Plant Protection (RU), Academia Sinica (TW)
Openalex Percentile: Top 72%
Synthetic Organic Chemistry Methods
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