Abstract WP259: Automated Quantification of Infarct Growth in Endovascular Thrombectomy Using Deep Learning

Introduction: Infarct growth during endovascular thrombectomy (EVT) predicts functional outcomes in acute ischemic stroke patients. Manual quantification from pre- and post-thrombectomy DWI is time-intensive and subject to inter-rater variability. Current deep learning methods focus on single-timepoint segmentation rather than integrated growth analysis. We developed and validated a dual-channel nnUNet model that simultaneously analyzes paired pre- and post-EVT DWI to quantify infarct growth. Methods: We included 118 paired pre- and post-thrombectomy DWI scans from a prospective cohort study as training cases and 82 scan pairs from two clinical trials as external validation set. Six nnUNet architectures were trained: two single-timepoint models using only baseline (BL) or follow-up (FU) scans, and four dual-channel models (DC 1-4) incorporating paired pre- and post-EVT scans. All models used equally weighted cross entropy- and dice-loss and were trained in a 5-fold cross validation setting. Growth for the BL + FU models was defined as the difference between the pre- and post-EVT segmentations. The dual-channel models targeted segmentation of three possible regions: growth area (expansion on post-EVT), common area (lesion present at both time points), and reduction area (lesion resolved on post-EVT) as demonstrated in Figure 1 . Models differed in region selection and hierarchical training order. We compared the models using median (IQR) Dice Similarity Coefficient (DSC) for growth area segmentation. The best-performing model was then evaluated on an external validation set using volumetric agreement (Bland-Altman analysis) for growth volume between ground truth and predicted segmentations, with the single timepoint BL-model also tested for comparison. Results: Median infarct growth was 29.77 mL (training) and 23.09 mL (validation). DC 4 achieved the highest Dice coefficient (0.750, IQR: 0.647-0.827), significantly outperforming all models except DC 2 ( Figure 2 ). External validation showed excellent volumetric agreement with mean bias of 2.77 mL (95% limits: -40.96 to 46.50 mL), compared to BL-model's bias of -22.81 mL (95% limits: -91.64 to 46.01 mL) (Figure 3). Conclusions: A dual-channel nnUNet model incorporating paired pre- and post-thrombectomy DWI significantly outperforms single time-point approaches for automated infarct growth quantification.

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Journal
Stroke
Published
2026-01-29
DOI
https://doi.org/10.1161/str.57.suppl_1.wp259
Primary Topic
Artificial Intelligence in Healthcare and Education
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article
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Abstract WP259: Automated Quantification of Infarct Growth in Endovascular Thrombectomy Using Deep Learning

Jeremy Josef Heit, Yongkai Liu, Ish Talati, Yannan Yu et al.
Stroke
Artificial Intelligence in Healthcare and Education
article

Abstract WP259: Automated Quantification of Infarct Growth in Endovascular Thrombectomy Using Deep Learning

Jeremy Josef Heit, Yongkai Liu, Ish Talati, Yannan Yu, greg albers, Henk Voorst
article en

Abstract

Introduction: Infarct growth during endovascular thrombectomy (EVT) predicts functional outcomes in acute ischemic stroke patients. Manual quantification from pre- and post-thrombectomy DWI is time-intensive and subject to inter-rater variability. Current deep learning methods focus on single-timepoint segmentation rather than integrated growth analysis. We developed and validated a dual-channel nnUNet model that simultaneously analyzes paired pre- and post-EVT DWI to quantify infarct growth. Methods: We included 118 paired pre- and post-thrombectomy DWI scans from a prospective cohort study as training cases and 82 scan pairs from two clinical trials as external validation set. Six nnUNet architectures were trained: two single-timepoint models using only baseline (BL) or follow-up (FU) scans, and four dual-channel models (DC 1-4) incorporating paired pre- and post-EVT scans. All models used equally weighted cross entropy- and dice-loss and were trained in a 5-fold cross validation setting. Growth for the BL + FU models was defined as the difference between the pre- and post-EVT segmentations. The dual-channel models targeted segmentation of three possible regions: growth area (expansion on post-EVT), common area (lesion present at both time points), and reduction area (lesion resolved on post-EVT) as demonstrated in Figure 1 . Models differed in region selection and hierarchical training order. We compared the models using median (IQR) Dice Similarity Coefficient (DSC) for growth area segmentation. The best-performing model was then evaluated on an external validation set using volumetric agreement (Bland-Altman analysis) for growth volume between ground truth and predicted segmentations, with the single timepoint BL-model also tested for comparison. Results: Median infarct growth was 29.77 mL (training) and 23.09 mL (validation). DC 4 achieved the highest Dice coefficient (0.750, IQR: 0.647-0.827), significantly outperforming all models except DC 2 ( Figure 2 ). External validation showed excellent volumetric agreement with mean bias of 2.77 mL (95% limits: -40.96 to 46.50 mL), compared to BL-model's bias of -22.81 mL (95% limits: -91.64 to 46.01 mL) (Figure 3). Conclusions: A dual-channel nnUNet model incorporating paired pre- and post-thrombectomy DWI significantly outperforms single time-point approaches for automated infarct growth quantification.

StrokeVol. 57(Suppl_1)
Stanford Medicine (US)
Openalex Percentile: Top 75%
Artificial Intelligence in Healthcare and Education
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