Enhancing Diagnostic Reliability of Ex Vivo Adenocarcinoma Identification Using Minimally Processed, Heterogeneous Raman Spectra and Deep Learning

ABSTRACT Reliable Raman Spectroscopy (RS)–based identification of lung adenocarcinoma remains challenging due to autofluorescence, low signal‐to‐noise ratios (SNR), and substantial spectral heterogeneity in clinical tissue samples. To evaluate whether robust diagnostic performance can be achieved under realistic acquisition conditions, this study investigated the use of minimally processed Raman spectra from ex vivo lung tissues to differentiate adenocarcinoma from matched normal samples. Spectra from 56 paired specimens underwent minimal preprocessing, limited to baseline subtraction and vector normalization. All spectra, including those with low‐SNR, which are typically excluded, were retained to reflect real‐world heterogeneity. Unsupervised K‐means clustering captured intra‐class variability, guiding a grouped, stratified train–validation–test split to ensure robust evaluation. The optimized ResNet‐34 model achieved a classification accuracy of 91.4%, sensitivity of 92.5%, specificity of 90.3%, and an area under the receiver operating characteristic curve (AUROC) of 0.956 on an independent test set. Integrated gradients (IG) analysis revealed that the model prioritized spectral regions associated with nucleic acid synthesis, protein turnover, and membrane remodeling, aligning with published studies. These findings demonstrate that deep learning applied to minimally processed, heterogeneous Raman spectra can yield reliable diagnostic performance without extensive preprocessing, supporting the feasibility of clinically realistic Raman‐based tissue assessment. Future work will extend this approach to additional lung cancer subtypes and in vivo settings.

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Publication Details

Journal
Journal of Raman Spectroscopy
Published
2026-01-29
DOI
https://doi.org/10.1002/jrs.70115
Primary Topic
Spectroscopy Techniques in Biomedical and Chemical Research
Type
article
Field-Weighted Citation Impact
0.00

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article

Enhancing Diagnostic Reliability of Ex Vivo Adenocarcinoma Identification Using Minimally Processed, Heterogeneous Raman Spectra and Deep Learning

Emma Velasco, Sally Yurgelevic, Michael Simoff, Gregory W. Auner et al.
Journal of Raman Spectroscopy
Spectroscopy Techniques in Biomedical and Chemical Research
article

Enhancing Diagnostic Reliability of Ex Vivo Adenocarcinoma Identification Using Minimally Processed, Heterogeneous Raman Spectra and Deep Learning

Emma Velasco, Sally Yurgelevic, Michael Simoff, Gregory W. Auner, Michelle Brusatori, Lekhana Katuri, S. Kiran Koya, Changhe Huang
article en

Abstract

ABSTRACT Reliable Raman Spectroscopy (RS)–based identification of lung adenocarcinoma remains challenging due to autofluorescence, low signal‐to‐noise ratios (SNR), and substantial spectral heterogeneity in clinical tissue samples. To evaluate whether robust diagnostic performance can be achieved under realistic acquisition conditions, this study investigated the use of minimally processed Raman spectra from ex vivo lung tissues to differentiate adenocarcinoma from matched normal samples. Spectra from 56 paired specimens underwent minimal preprocessing, limited to baseline subtraction and vector normalization. All spectra, including those with low‐SNR, which are typically excluded, were retained to reflect real‐world heterogeneity. Unsupervised K‐means clustering captured intra‐class variability, guiding a grouped, stratified train–validation–test split to ensure robust evaluation. The optimized ResNet‐34 model achieved a classification accuracy of 91.4%, sensitivity of 92.5%, specificity of 90.3%, and an area under the receiver operating characteristic curve (AUROC) of 0.956 on an independent test set. Integrated gradients (IG) analysis revealed that the model prioritized spectral regions associated with nucleic acid synthesis, protein turnover, and membrane remodeling, aligning with published studies. These findings demonstrate that deep learning applied to minimally processed, heterogeneous Raman spectra can yield reliable diagnostic performance without extensive preprocessing, supporting the feasibility of clinically realistic Raman‐based tissue assessment. Future work will extend this approach to additional lung cancer subtypes and in vivo settings.

Journal of Raman Spectroscopy
Wayne State University (US), Henry Ford Hospital (US), Integrated Sensors (United States) (US), University of Toledo (US)
Wayne State University, National Institutes of Health, National Institute of General Medical Sciences
Openalex Percentile: Top 76%
Spectroscopy Techniques in Biomedical and Chemical Research
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