Methane oxidation and C1 metabolism in a propane-utilizer Gordonia sp. strain TY-5

Gordonia sp. strain TY-5 utilizes propane, but not methane, as the sole carbon source. In this strain, propane is oxidized to 2-propanol by propane monooxygenase (Prm), and 2-propanol is further metabolized to methyl acetate, which is subsequently converted into acetate and methanol. However, methane and methanol metabolism in strain TY-5 has remained unclear. In this study, draft genome analysis revealed that strain TY-5 possesses the one-carbon (C1) dissimilation pathway, in which methanol is oxidized to CO₂, but lacks a C1 assimilation pathway, suggesting that methanol is not utilized as the carbon source but is used as an energy source. Furthermore, we found that strain TY-5 can oxidize methane by Prm. Gene disruption analysis revealed that N, N-dimethyl-4-nitrosoaniline-dependent methanol dehydrogenase contributes to methanol oxidation in strain TY-5. Our findings provide new insights into the physiological significance of C1 and hydrocarbon metabolism for adapting the natural environment where methane and propane coexist.

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Kyoto University Research Information Repository (Kyoto University)
Published
2026-01-26
Primary Topic
Microbial metabolism and enzyme function
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article

Methane oxidation and C1 metabolism in a propane-utilizer Gordonia sp. strain TY-5

Koji Iwasaki, Hiroya Yurimoto, Kohei Kida, Yasuyoshi Sakai et al.
Kyoto University Research Information Repository (Kyoto University)
Microbial metabolism and enzyme function
article

Methane oxidation and C1 metabolism in a propane-utilizer Gordonia sp. strain TY-5

Koji Iwasaki, Hiroya Yurimoto, Kohei Kida, Yasuyoshi Sakai, Oktay Gafarov
article en

Abstract

Gordonia sp. strain TY-5 utilizes propane, but not methane, as the sole carbon source. In this strain, propane is oxidized to 2-propanol by propane monooxygenase (Prm), and 2-propanol is further metabolized to methyl acetate, which is subsequently converted into acetate and methanol. However, methane and methanol metabolism in strain TY-5 has remained unclear. In this study, draft genome analysis revealed that strain TY-5 possesses the one-carbon (C1) dissimilation pathway, in which methanol is oxidized to CO₂, but lacks a C1 assimilation pathway, suggesting that methanol is not utilized as the carbon source but is used as an energy source. Furthermore, we found that strain TY-5 can oxidize methane by Prm. Gene disruption analysis revealed that N, N-dimethyl-4-nitrosoaniline-dependent methanol dehydrogenase contributes to methanol oxidation in strain TY-5. Our findings provide new insights into the physiological significance of C1 and hydrocarbon metabolism for adapting the natural environment where methane and propane coexist.

Kyoto University Research Information Repository (Kyoto University)
Openalex Percentile: Top 76%
Microbial metabolism and enzyme function
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Methane oxidation and C1 metabolism in a propane-utilizer Gordonia sp. strain TY-5 — Koji Iwasaki, Hiroya Yurimoto, et al. · Kyoto University Research Information Repository (Kyoto University) (2026) | TGRS Research Map | TGRS