A digital twin for real-time biodiversity forecasting with citizen science data

Citizen science provides large amounts of biodiversity data. Key challenges in unlocking its full potential include engaging citizens with limited species identification skills and accelerating the transition from data collection to research and monitoring outputs. Here we use a large dataset from Finland to show how even citizens who cannot identify birds themselves can contribute to real-time predictions of avian distributions. This is achieved through a digital twin that combines smartphone-based citizen science with long-term knowledge in a continuously updating model. The app submits raw audio to a backend that classifies birds with machine learning, reducing variation in data quality and enabling validation and reclassification by continuously improving classifiers. We counteracted spatiotemporal sampling biases by interval recordings and permanent point count networks. Over 2 years, the app generated 15 million bird detections. Independent test data show that the digital-twin-informed models are more accurate at predicting bird spatiotemporal distributions. Because our approach is highly scalable and has the potential to generate biomonitoring data even in understudied areas, it could accelerate the flow of reliable biodiversity information and increase inclusivity in citizen science projects.

Authors

Institutions

Publication Details

Journal
Nature Ecology & Evolution
Published
2026-01-27
DOI
https://doi.org/10.1038/s41559-025-02966-3
Primary Topic
Species Distribution and Climate Change
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A digital twin for real-time biodiversity forecasting with citizen science data

Allan Tainá Souza, Aleksi Kallio, Matti Kotakorpi, Kim Kuntze et al.
Nature Ecology & Evolution
Species Distribution and Climate Change
article

A digital twin for real-time biodiversity forecasting with citizen science data

Allan Tainá Souza, Aleksi Kallio, Matti Kotakorpi, Kim Kuntze, Jemal Tahir, Anni Aroluoma, Outa Kalttopää, Patrik Lauha, Anniina Koliseva, Mikko Oranen, Maija Sujala, Jari Hänninen, Marko Mutanen, Tomas Roslin, Saana Tepsa, Mikko Vallinmäki, Aurélie Vancraeyenest, David Dunson, Jesse Patrick Harrison, Pauliina Schiestl-Aalto, Ari Lehtiö, Aleksi Lehikoinen, Otso Ovaskainen, Mikko Sipilä, Phillip C. Watts, Riku Paavola, Ossi Nokelainen, Panu Somervuo, Esa-Pekka Tuominen, Joni Uusitalo, Nerea Abrego, Risto Renkonen, Steven Winter, Hannu Autto, Gabriela Zuquim, John Loehr, Silja Veikkolainen, Jasmin Inkinen, Janne Koskinen, Gleb Tikhonov, Mikko Heikkinen, Janne Sundell, Emma Vatka, Alpo Turunen, Jussi Talaskivi
article en

Abstract

Citizen science provides large amounts of biodiversity data. Key challenges in unlocking its full potential include engaging citizens with limited species identification skills and accelerating the transition from data collection to research and monitoring outputs. Here we use a large dataset from Finland to show how even citizens who cannot identify birds themselves can contribute to real-time predictions of avian distributions. This is achieved through a digital twin that combines smartphone-based citizen science with long-term knowledge in a continuously updating model. The app submits raw audio to a backend that classifies birds with machine learning, reducing variation in data quality and enabling validation and reclassification by continuously improving classifiers. We counteracted spatiotemporal sampling biases by interval recordings and permanent point count networks. Over 2 years, the app generated 15 million bird detections. Independent test data show that the digital-twin-informed models are more accurate at predicting bird spatiotemporal distributions. Because our approach is highly scalable and has the potential to generate biomonitoring data even in understudied areas, it could accelerate the flow of reliable biodiversity information and increase inclusivity in citizen science projects.

Nature Ecology & EvolutionVol. 10(3)
University of Helsinki (FI), University of Turku (FI), Duke University (US), Helsinki Institute of Physics (FI), Swedish University of Agricultural Sciences (SE), Helsinki Institute for Information Technology (FI), Finnish Museum of Natural History (FI), CSC - IT Center for Science (Finland) (FI), University of Jyväskylä (FI), University of Oulu (FI), Aalto University (FI)
National Science Foundation, European Commission, Jane ja Aatos Erkon Säätiö, China Scholarship Council, Jyväskylän Yliopisto
Openalex Percentile: Top 78%
Species Distribution and Climate Change
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.