Chromosome-level reference genome of Tylorrhynchus heterochaetus (Annelida, Nereididae)

The <i>Tylorrhynchus heterochaetus</i>, a polychaete benthic invertebrate belonging to the Nereididae family, has emerged as a promising aquaculture species. It is highly regarded for its nutritional profile, with protein accounting for up to 60% of its dry weight, as well as its balanced amino acid composition. This has earned it the nickname "aquatic cordyceps". However, wild populations of this species have declined significantly due to environmental shifts and human activities, with local extinctions reported in certain regions. A critical barrier to advancing its population genetics and conservation biology has been the absence of a chromosomal-level reference genome for <i>T. heterochaetus</i>. To address this gap, we present the first chromosome-level genome assembly of <i>T. heterochaetus</i>, generated using PacBio HiFi sequencing data and Hi-C technology. The final assembly spans 782.25 Mb with a scaffold N50 of 75.39 Mb, successfully anchored to 11 pseudo-chromosomes. Repetitive sequences account for 428.09 Mb (54.73%) of the genome, and 20,145 protein-coding genes were annotated. This study provides foundational insights into the genetics, genomics, and evolutionary history of <i>T. heterochaetus</i>, laying a critical groundwork for future research and enabling the development of targeted genetic conservation strategies.

Authors

Institutions

Publication Details

Journal
Frontiers in Genetics
Published
2026-01-27
DOI
https://doi.org/10.3389/fgene.2026.1753621
Primary Topic
Algal biology and biofuel production
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Chromosome-level reference genome of Tylorrhynchus heterochaetus (Annelida, Nereididae)

Shengkang Li, Xuemin Zhang, Xinghan Chen, Yuanyuan Si et al.
Frontiers in Genetics
Algal biology and biofuel production
article

Chromosome-level reference genome of Tylorrhynchus heterochaetus (Annelida, Nereididae)

Shengkang Li, Xuemin Zhang, Xinghan Chen, Yuanyuan Si, Wei Yang, Zining Meng, Bin Fan, Ruiwen Xu
article en

Abstract

The <i>Tylorrhynchus heterochaetus</i>, a polychaete benthic invertebrate belonging to the Nereididae family, has emerged as a promising aquaculture species. It is highly regarded for its nutritional profile, with protein accounting for up to 60% of its dry weight, as well as its balanced amino acid composition. This has earned it the nickname "aquatic cordyceps". However, wild populations of this species have declined significantly due to environmental shifts and human activities, with local extinctions reported in certain regions. A critical barrier to advancing its population genetics and conservation biology has been the absence of a chromosomal-level reference genome for <i>T. heterochaetus</i>. To address this gap, we present the first chromosome-level genome assembly of <i>T. heterochaetus</i>, generated using PacBio HiFi sequencing data and Hi-C technology. The final assembly spans 782.25 Mb with a scaffold N50 of 75.39 Mb, successfully anchored to 11 pseudo-chromosomes. Repetitive sequences account for 428.09 Mb (54.73%) of the genome, and 20,145 protein-coding genes were annotated. This study provides foundational insights into the genetics, genomics, and evolutionary history of <i>T. heterochaetus</i>, laying a critical groundwork for future research and enabling the development of targeted genetic conservation strategies.

Frontiers in GeneticsVol. 17
Sun Yat-sen University (CN), Shantou University (CN), Yangzhou Polytechnic Institute (CN)
Basic and Applied Basic Research Foundation of Guangdong Province
Openalex Percentile: Top 78%
Algal biology and biofuel production
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.