Nasal Staphylococcus aureus in COVID-19 Patients Shows No Enrichment of High-Risk Clones

<i>Staphylococcus aureus</i> nasal carriage is a potential source of secondary infections in COVID-19 patients, yet it remains unclear whether SARS-CoV-2 infection favors colonization by more virulent or resistant strains. We analyzed 31 nasal <i>S. aureus</i> isolates from hospitalized COVID-19 patients to assess antimicrobial resistance, virulence gene content, and genetic diversity. Only two isolates (6.4%) were methicillin resistant, and most strains showed limited resistance beyond the MLSB phenotype. Adhesin genes were highly prevalent, whereas toxin genes were detected in only 16.1% of isolates. <i>Spa</i> typing revealed high genetic diversity with no dominant clone. Overall, <i>S. aureus</i> isolates from COVID-19 patients did not differ substantially from previously described carriage strains, suggesting no selective enrichment of highly virulent or resistant lineages during SARS-CoV-2 infection.

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Publication Details

Journal
International Journal of Molecular Sciences
Published
2026-01-27
DOI
https://doi.org/10.3390/ijms27031250
Primary Topic
Antimicrobial Resistance in Staphylococcus
Type
article
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article

Nasal Staphylococcus aureus in COVID-19 Patients Shows No Enrichment of High-Risk Clones

Katarzyna Kosznik-Kwaśnicka, Agnieszka Necel, Maja Kosecka-Strojek, Magdalena Pałys et al.
International Journal of Molecular Sciences
Antimicrobial Resistance in Staphylococcus
article

Nasal Staphylococcus aureus in COVID-19 Patients Shows No Enrichment of High-Risk Clones

Katarzyna Kosznik-Kwaśnicka, Agnieszka Necel, Maja Kosecka-Strojek, Magdalena Pałys, Anna Pałubicka, Lidia Piechowicz, Jacek Międzobrodzki
article en

Abstract

<i>Staphylococcus aureus</i> nasal carriage is a potential source of secondary infections in COVID-19 patients, yet it remains unclear whether SARS-CoV-2 infection favors colonization by more virulent or resistant strains. We analyzed 31 nasal <i>S. aureus</i> isolates from hospitalized COVID-19 patients to assess antimicrobial resistance, virulence gene content, and genetic diversity. Only two isolates (6.4%) were methicillin resistant, and most strains showed limited resistance beyond the MLSB phenotype. Adhesin genes were highly prevalent, whereas toxin genes were detected in only 16.1% of isolates. <i>Spa</i> typing revealed high genetic diversity with no dominant clone. Overall, <i>S. aureus</i> isolates from COVID-19 patients did not differ substantially from previously described carriage strains, suggesting no selective enrichment of highly virulent or resistant lineages during SARS-CoV-2 infection.

International Journal of Molecular SciencesVol. 27(3)
Jagiellonian University (PL), The Wojciech Kętrzyński Northern Institute (PL), Gdańsk Medical University (PL)
Openalex Percentile: Top 75%
Antimicrobial Resistance in Staphylococcus
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Nasal Staphylococcus aureus in COVID-19 Patients Shows No Enrichment of High-Risk Clones — Katarzyna Kosznik-Kwaśnicka, Agnieszka Necel, et al. · International Journal of Molecular Sciences (2026) | TGRS Research Map | TGRS