Conditional Tabular Generative Adversarial Network Based Clinical Data Augmentation for Enhanced Predictive Modeling in Chronic Kidney Disease Diagnosis

The lack of clinical data for chronic kidney disease (CKD) prediction frequently results in model overfitting and inadequate generalization to novel samples. This research mitigates this constraint by utilizing a Conditional Tabular Generative Adversarial Network (CTGAN) to enhance a constrained CKD dataset sourced from the University of California, Irvine (UCI) Machine Learning Repository. The CTGAN model was trained to produce realistic synthetic samples that preserve the statistical and feature distributions of the original dataset. Multiple machine learning models, such as AdaBoost, Random Forest, Gradient Boosting, and K-Nearest Neighbors (KNN), were assessed on both the original and enhanced datasets with incrementally increasing degrees of synthetic data dilution. AdaBoost attained 100% accuracy on the original dataset, signifying considerable overfitting; however, the model exhibited enhanced generalization and stability with the CTGAN-augmented data. The occurrence of 100% test accuracy in several models should not be interpreted as realistic clinical performance. Instead, it reflects the limited size, clean structure, and highly separable feature distributions of the UCI CKD dataset. Similar behavior has been reported in multiple previous studies using this dataset. Such perfect accuracy is a strong indication of overfitting and limited generalizability, rather than feature or label leakage. This observation directly motivates the need for controlled data augmentation to introduce variability and improve model robustness. The dataset with the greatest dilution, comprising 2000 synthetic cases, attained a test accuracy of 95.27% utilizing a stochastic gradient boosting approach. Ensemble learning techniques, particularly gradient boosting and random forest, regularly surpassed conventional models like KNN in terms of predicted accuracy and resilience. The results demonstrate that CTGAN-based data augmentation introduces critical variability, diminishes model bias, and serves as an effective regularization technique. This method provides a viable alternative for reducing overfitting and improving predictive modeling accuracy in data-deficient medical fields, such as chronic kidney disease diagnosis.

Authors

Institutions

Publication Details

Journal
BioMedInformatics
Published
2026-01-22
DOI
https://doi.org/10.3390/biomedinformatics6010006
Primary Topic
Artificial Intelligence in Healthcare
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Conditional Tabular Generative Adversarial Network Based Clinical Data Augmentation for Enhanced Predictive Modeling in Chronic Kidney Disease Diagnosis

Nithesh Naik, Veerendra Nath Jasthi, Princy Randhawa, Gireesh Kumar Kaushik et al.
BioMedInformatics
Artificial Intelligence in Healthcare
article

Conditional Tabular Generative Adversarial Network Based Clinical Data Augmentation for Enhanced Predictive Modeling in Chronic Kidney Disease Diagnosis

Nithesh Naik, Veerendra Nath Jasthi, Princy Randhawa, Gireesh Kumar Kaushik, Malathy Batamulay, Manish Rawat, Kumar Piyush, S. N. Prasad, Kiran Veernapu
article en

Abstract

The lack of clinical data for chronic kidney disease (CKD) prediction frequently results in model overfitting and inadequate generalization to novel samples. This research mitigates this constraint by utilizing a Conditional Tabular Generative Adversarial Network (CTGAN) to enhance a constrained CKD dataset sourced from the University of California, Irvine (UCI) Machine Learning Repository. The CTGAN model was trained to produce realistic synthetic samples that preserve the statistical and feature distributions of the original dataset. Multiple machine learning models, such as AdaBoost, Random Forest, Gradient Boosting, and K-Nearest Neighbors (KNN), were assessed on both the original and enhanced datasets with incrementally increasing degrees of synthetic data dilution. AdaBoost attained 100% accuracy on the original dataset, signifying considerable overfitting; however, the model exhibited enhanced generalization and stability with the CTGAN-augmented data. The occurrence of 100% test accuracy in several models should not be interpreted as realistic clinical performance. Instead, it reflects the limited size, clean structure, and highly separable feature distributions of the UCI CKD dataset. Similar behavior has been reported in multiple previous studies using this dataset. Such perfect accuracy is a strong indication of overfitting and limited generalizability, rather than feature or label leakage. This observation directly motivates the need for controlled data augmentation to introduce variability and improve model robustness. The dataset with the greatest dilution, comprising 2000 synthetic cases, attained a test accuracy of 95.27% utilizing a stochastic gradient boosting approach. Ensemble learning techniques, particularly gradient boosting and random forest, regularly surpassed conventional models like KNN in terms of predicted accuracy and resilience. The results demonstrate that CTGAN-based data augmentation introduces critical variability, diminishes model bias, and serves as an effective regularization technique. This method provides a viable alternative for reducing overfitting and improving predictive modeling accuracy in data-deficient medical fields, such as chronic kidney disease diagnosis.

BioMedInformaticsVol. 6(1)
INTI International University (MY), Manipal Academy of Higher Education (IN), Brown University (US), Care Resource (US), Manipal University Jaipur, University of Colorado Colorado Springs (US), Dr. Hari Singh Gour University (IN), University of Rajasthan (IN)
Openalex Percentile: Top 80%
Artificial Intelligence in Healthcare
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.