Skeletal Diversity of Diterpenoids Isolated from the Soft Coral <i>Sclerophytum heterospiculatum</i> in Kikai Island

Five new compounds with diverse skeletons, namely, lobophytumins G (<b>1</b>, prenylgermacrane-type), H (<b>2</b>, spatane-type), sclerophytumins A (<b>3</b>, kikainane-type), B (<b>4</b>, prenyloplopanone-type), and <i>ent</i>-obscuronatin (<b>5</b>, prenylgermacrane-type), were isolated from the soft coral <i>Sclerophytum heterospiculatum</i> collected from Kikai Island, Kagoshima Prefecture, Japan. Their chemical structures, including their relative configurations, were elucidated by detailed analysis of spectroscopic data such as NMR and direct analysis in real-time time-of-flight mass spectrometry (DART-TOF MS), as well as by comparison with related known compounds. The relative and absolute configurations of the cyclic skeletons in <b>1</b>-<b>5</b> were determined through extensive spectroscopic data analysis, DFT-based DP4 analysis, and electronic circular dichroism (ECD) calculations. Notably, the <i>trans</i>-11-oxabicyclo[4.4.1]undecane skeleton observed in <b>3</b> represents the first report of this framework from a marine organism. In addition, DP4 analysis distinguished the asymmetric center at C-11 in the acyclic portion, thereby revealing the stereochemistry of the linear side chain bearing a terminal C5 prenyl unit in <b>4</b>. Based on the obtained relative and absolute configurations, biosynthetic pathways were also proposed. Furthermore, the cytotoxicities of isolated compounds <b>1</b>-<b>5</b> were evaluated against four human cancer cell lines.

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Journal
Journal of Natural Products
Published
2026-01-26
DOI
https://doi.org/10.1021/acs.jnatprod.5c01362
Primary Topic
Marine Sponges and Natural Products
Type
article
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article

Skeletal Diversity of Diterpenoids Isolated from the Soft Coral Sclerophytum heterospiculatum in Kikai Island

Tomoki Tsuruta, Shinsuke Marumoto, Keisuke Nishikawa, Masaru Hashimoto et al.
Journal of Natural Products
Marine Sponges and Natural Products
article

Skeletal Diversity of Diterpenoids Isolated from the Soft Coral Sclerophytum heterospiculatum in Kikai Island

Tomoki Tsuruta, Shinsuke Marumoto, Keisuke Nishikawa, Masaru Hashimoto, Yoshiki Morimoto, Motohiko Ukiya, Hiroyuki Miyake, Kazuki Tani, Matsumi Doe, Yukika Yoshino, Takahiro Ishii, Ayaka Fukushige
article en

Abstract

Five new compounds with diverse skeletons, namely, lobophytumins G (<b>1</b>, prenylgermacrane-type), H (<b>2</b>, spatane-type), sclerophytumins A (<b>3</b>, kikainane-type), B (<b>4</b>, prenyloplopanone-type), and <i>ent</i>-obscuronatin (<b>5</b>, prenylgermacrane-type), were isolated from the soft coral <i>Sclerophytum heterospiculatum</i> collected from Kikai Island, Kagoshima Prefecture, Japan. Their chemical structures, including their relative configurations, were elucidated by detailed analysis of spectroscopic data such as NMR and direct analysis in real-time time-of-flight mass spectrometry (DART-TOF MS), as well as by comparison with related known compounds. The relative and absolute configurations of the cyclic skeletons in <b>1</b>-<b>5</b> were determined through extensive spectroscopic data analysis, DFT-based DP4 analysis, and electronic circular dichroism (ECD) calculations. Notably, the <i>trans</i>-11-oxabicyclo[4.4.1]undecane skeleton observed in <b>3</b> represents the first report of this framework from a marine organism. In addition, DP4 analysis distinguished the asymmetric center at C-11 in the acyclic portion, thereby revealing the stereochemistry of the linear side chain bearing a terminal C5 prenyl unit in <b>4</b>. Based on the obtained relative and absolute configurations, biosynthetic pathways were also proposed. Furthermore, the cytotoxicities of isolated compounds <b>1</b>-<b>5</b> were evaluated against four human cancer cell lines.

Journal of Natural ProductsVol. 89(2)
Nihon University (JP), Kagoshima University (JP), Hirosaki University (JP), University of the Ryukyus (JP), Osaka Metropolitan University (JP), Kindai University (JP)
Life below water
Openalex Percentile: Top 79%
Marine Sponges and Natural Products
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