Precursor-Dependent Routing of Aromatic Amino Acids Determines Lignin Structure in Grasses by Sensitivity-Enhanced Solid-State NMR

Lignin biosynthesis in grasses exhibits unique metabolic flexibility, yet the precursor-specific routing of carbon into lignin polymers remains poorly resolved <i>in planta</i>. Here, we combine <sup>13</sup>C-isotope labeling with solid-state NMR under sensitivity-enhancement by dynamic nuclear polarization (DNP), to directly track phenylalanine- and tyrosine-derived carbon incorporation into the lignin polymer in <i>Brachypodium distachyon</i>. Precursor-specific <sup>13</sup>C labeling reveals that phenylalanine is the dominant contributor to canonical guaiacyl and syringyl lignins, whereas tyrosine preferentially enriches hydroxyphenyl lignin and hydroxycinnamates, including ferulates characteristic of grass cell walls. Two-dimensional <sup>13</sup>C-<sup>13</sup>C correlation NMR resolves distinct lignin moieties arising from each precursor. Disruption of <i>p</i>-coumarate 3-hydroxylase (C3H) selectively impairs phenylalanine-derived lignification, while tyrosine-derived lignin remains comparatively unchanged, maintaining polymer assembly through alternative metabolic routes. These findings show precursor-dependent control of lignin composition and reveal tyrosine-mediated lignification as a compensatory pathway in grasses. This work also establishes precursor-resolved solid-state NMR and DNP as a powerful framework for dissecting lignin biosynthesis and metabolic plasticity in plant cell walls.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-01-21
DOI
https://doi.org/10.64898/2026.01.17.700116
Primary Topic
Plant Gene Expression Analysis
Type
article
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article

Precursor-Dependent Routing of Aromatic Amino Acids Determines Lignin Structure in Grasses by Sensitivity-Enhanced Solid-State NMR

Shubha S. Gunaga, Debkumar Debnath, Max Bentelspacher, Ying Xu et al.
bioRxiv (Cold Spring Harbor Laboratory)
Plant Gene Expression Analysis
article

Precursor-Dependent Routing of Aromatic Amino Acids Determines Lignin Structure in Grasses by Sensitivity-Enhanced Solid-State NMR

Shubha S. Gunaga, Debkumar Debnath, Max Bentelspacher, Ying Xu, Peng Xiao, Priya Sahu, Jaime Barros, Tuo Wang, Faith J. Scott
article en

Abstract

Lignin biosynthesis in grasses exhibits unique metabolic flexibility, yet the precursor-specific routing of carbon into lignin polymers remains poorly resolved <i>in planta</i>. Here, we combine <sup>13</sup>C-isotope labeling with solid-state NMR under sensitivity-enhancement by dynamic nuclear polarization (DNP), to directly track phenylalanine- and tyrosine-derived carbon incorporation into the lignin polymer in <i>Brachypodium distachyon</i>. Precursor-specific <sup>13</sup>C labeling reveals that phenylalanine is the dominant contributor to canonical guaiacyl and syringyl lignins, whereas tyrosine preferentially enriches hydroxyphenyl lignin and hydroxycinnamates, including ferulates characteristic of grass cell walls. Two-dimensional <sup>13</sup>C-<sup>13</sup>C correlation NMR resolves distinct lignin moieties arising from each precursor. Disruption of <i>p</i>-coumarate 3-hydroxylase (C3H) selectively impairs phenylalanine-derived lignification, while tyrosine-derived lignin remains comparatively unchanged, maintaining polymer assembly through alternative metabolic routes. These findings show precursor-dependent control of lignin composition and reveal tyrosine-mediated lignification as a compensatory pathway in grasses. This work also establishes precursor-resolved solid-state NMR and DNP as a powerful framework for dissecting lignin biosynthesis and metabolic plasticity in plant cell walls.

bioRxiv (Cold Spring Harbor Laboratory)
Florida State University (US), National High Magnetic Field Laboratory (US), University of Missouri (US), Michigan State University (US)
Openalex Percentile: Top 79%
Plant Gene Expression Analysis
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