OpenRefine I: Cleaning Messy Data with Ease

This presentation was given during the WiNoDa winter school, a five-day intensive course on the topic of Research with Natural Science Collections. Data, Quality, and Methods from 24-28 November 2025. Organization: German Federation for Biological Data e.V. (GFBio) with support from the Museum für Naturkunde Berlin (MfN), German Archaeological Institute (DAI), Vernetzungs- und Kompetenzstelle Open Access Brandenburg (VuK) Abstract: OpenRefine is a tool to clean tabular data and that runs on one’s own computer and can be used via the browser. In this hands-on, we will first get familiar with the tool by taking a look at the basic functionalities such as Facets & Filtering and automated transformations before going deeper into the more complex features, such as Clustering & Merging and calling external services. This talk is aimed both at novice and experienced users of OpenRefine, so no previous experience with the tool or knowledge of programming languages is required but might be advantages for the later and more complex features. Dataset(s) to use (source, license; note any sensitivity): Dedicated training dataset: a subset of the BGBM Herbarium, https://doi.org/10.5281/zenodo.14918375

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-01-21
DOI
https://doi.org/10.5281/zenodo.18327565
Primary Topic
Biomedical Text Mining and Ontologies
Type
article
Field-Weighted Citation Impact
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article

OpenRefine I: Cleaning Messy Data with Ease

David Fichtmueller
Zenodo (CERN European Organization for Nuclear Research)
Biomedical Text Mining and Ontologies
article

OpenRefine I: Cleaning Messy Data with Ease

David Fichtmueller
article en

Abstract

This presentation was given during the WiNoDa winter school, a five-day intensive course on the topic of Research with Natural Science Collections. Data, Quality, and Methods from 24-28 November 2025. Organization: German Federation for Biological Data e.V. (GFBio) with support from the Museum für Naturkunde Berlin (MfN), German Archaeological Institute (DAI), Vernetzungs- und Kompetenzstelle Open Access Brandenburg (VuK) Abstract: OpenRefine is a tool to clean tabular data and that runs on one’s own computer and can be used via the browser. In this hands-on, we will first get familiar with the tool by taking a look at the basic functionalities such as Facets & Filtering and automated transformations before going deeper into the more complex features, such as Clustering & Merging and calling external services. This talk is aimed both at novice and experienced users of OpenRefine, so no previous experience with the tool or knowledge of programming languages is required but might be advantages for the later and more complex features. Dataset(s) to use (source, license; note any sensitivity): Dedicated training dataset: a subset of the BGBM Herbarium, https://doi.org/10.5281/zenodo.14918375

Zenodo (CERN European Organization for Nuclear Research)
Botanic Garden and Botanical Museum Berlin (DE)
Quality Education
Openalex Percentile: Top 80%
Biomedical Text Mining and Ontologies
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