<i>Aspergillus fumigatus</i> PolX1 is an early ancestor of vertebrate terminal deoxynucleotidyl transferases

X-family DNA polymerases (PolXs) perform essential roles in repair and maintenance of the genome. One branch of the PolXs have evolved to function as terminal transferases, extending DNA ends in a template-independent manner, unusual for polymerases. To date, template independence has been shown exclusively in metazoans. We analysed PolXs to determine the phylogenetic evolution of the terminal transferase function in fungal PolXs. We have identified and characterised a PolX from the saprophytic fungus Aspergillus fumigatus, named AfPolX1, that demonstrates inherent terminal transferase ability under physiologically relevant conditions. This is the first report for a fungal terminal deoxynucleotidyl transferase (TdT). Our findings indicate that template-independent 'creative' synthesis evolved earlier than previously thought and can be traced as far back as the early Polµ's of multicellular fungi. We further show that like TdT, AfPolX1 is capable of introducing ribonucleotides and various nucleotides with 2' ribose modifications, giving credence to the idea that the structural features necessary for PolXs observed promiscuous behaviour during template independence existed in the PolXs of early eukaryotes. Our findings suggest AfPolX1 as a promising candidate for use in enzymatic oligonucleotide synthesis.

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Publication Details

Journal
Nucleic Acids Research
Published
2025-12-22
DOI
https://doi.org/10.1093/nar/gkaf1497
Primary Topic
DNA Repair Mechanisms
Type
article
Field-Weighted Citation Impact
0.00

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article

Aspergillus fumigatus PolX1 is an early ancestor of vertebrate terminal deoxynucleotidyl transferases

Caecilie M. M. Benckendorff, Katie E. Davis, Purba Mukherjee, Najma Parveen et al.
Nucleic Acids Research
DNA Repair Mechanisms
article

Aspergillus fumigatus PolX1 is an early ancestor of vertebrate terminal deoxynucleotidyl transferases

Caecilie M. M. Benckendorff, Katie E. Davis, Purba Mukherjee, Najma Parveen, Sophia Steblina, Gavin J Miller, Abhijit Behera
article en

Abstract

X-family DNA polymerases (PolXs) perform essential roles in repair and maintenance of the genome. One branch of the PolXs have evolved to function as terminal transferases, extending DNA ends in a template-independent manner, unusual for polymerases. To date, template independence has been shown exclusively in metazoans. We analysed PolXs to determine the phylogenetic evolution of the terminal transferase function in fungal PolXs. We have identified and characterised a PolX from the saprophytic fungus Aspergillus fumigatus, named AfPolX1, that demonstrates inherent terminal transferase ability under physiologically relevant conditions. This is the first report for a fungal terminal deoxynucleotidyl transferase (TdT). Our findings indicate that template-independent 'creative' synthesis evolved earlier than previously thought and can be traced as far back as the early Polµ's of multicellular fungi. We further show that like TdT, AfPolX1 is capable of introducing ribonucleotides and various nucleotides with 2' ribose modifications, giving credence to the idea that the structural features necessary for PolXs observed promiscuous behaviour during template independence existed in the PolXs of early eukaryotes. Our findings suggest AfPolX1 as a promising candidate for use in enzymatic oligonucleotide synthesis.

Nucleic Acids ResearchVol. 54(3)
Indian Institute of Science Education and Research Kolkata (IN), University of York (GB), Keele University (GB), University of Sheffield (GB)
UK Research and Innovation, Engineering and Physical Sciences Research Council
Openalex Percentile: Top 34%
DNA Repair Mechanisms
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