A cytokine receptor–targeting chimera toolbox for expanding extracellular targeted protein degradation

Extracellular targeted protein degradation (eTPD) is an important new modality for manipulating the extracellular proteome. However, most eTPD receptors are expressed broadly or are restricted to the liver, limiting specific degradation in other tissues. Cytokine receptor-targeting chimeras (kineTACs) are genetically encoded bispecifics for eTPD that fuse a natural ligand like CXCL12 to an antibody, directing soluble or membrane proteins for lysosomal degradation using the widely expressed chemokine receptor CXCR7 (K. Pance <i>et al.</i>, <i>Nat. Biotechnol.</i> <b>41</b>, 273-281 (2023)]. Here, we dramatically expand the kineTAC toolbox by constructing 81 different kineTACs based on an unbiased list of cytokines, chemokines, and growth factors. Remarkably, 55 of these expressed at suitable levels for analysis without any optimization. Many of these kineTACs bind receptors that have unique cell-type expression profiles, allowing for eTPD in specific cells and tissues, and some were more potent than the original CXCL12-based kineTAC against specific targets. We further show the internalizing capability of a kineTAC can enhance the performance of antibody drug conjugates. We believe these simple, genetically encoded tools will be useful for expanding the applications for optimized or cell type-selective eTPD.

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Journal
Proceedings of the National Academy of Sciences
Published
2026-01-21
DOI
https://doi.org/10.1073/pnas.2524129123
Primary Topic
Protein Degradation and Inhibitors
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article
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article

A cytokine receptor–targeting chimera toolbox for expanding extracellular targeted protein degradation

Brandon B. Holmes, Zi Yao, Fangzhu Zhao, Trenton M. Peters-Clarke et al.
Proceedings of the National Academy of Sciences
Protein Degradation and Inhibitors
article

A cytokine receptor–targeting chimera toolbox for expanding extracellular targeted protein degradation

Brandon B. Holmes, Zi Yao, Fangzhu Zhao, Trenton M. Peters-Clarke, Kaan Kumru, James Wells, Yun Zhang, Kevin K Leung, Emilio Ferrara
article en

Abstract

Extracellular targeted protein degradation (eTPD) is an important new modality for manipulating the extracellular proteome. However, most eTPD receptors are expressed broadly or are restricted to the liver, limiting specific degradation in other tissues. Cytokine receptor-targeting chimeras (kineTACs) are genetically encoded bispecifics for eTPD that fuse a natural ligand like CXCL12 to an antibody, directing soluble or membrane proteins for lysosomal degradation using the widely expressed chemokine receptor CXCR7 (K. Pance <i>et al.</i>, <i>Nat. Biotechnol.</i> <b>41</b>, 273-281 (2023)]. Here, we dramatically expand the kineTAC toolbox by constructing 81 different kineTACs based on an unbiased list of cytokines, chemokines, and growth factors. Remarkably, 55 of these expressed at suitable levels for analysis without any optimization. Many of these kineTACs bind receptors that have unique cell-type expression profiles, allowing for eTPD in specific cells and tissues, and some were more potent than the original CXCL12-based kineTAC against specific targets. We further show the internalizing capability of a kineTAC can enhance the performance of antibody drug conjugates. We believe these simple, genetically encoded tools will be useful for expanding the applications for optimized or cell type-selective eTPD.

Proceedings of the National Academy of SciencesVol. 123(4)
University of California, San Francisco (US), University of California, Berkeley (US)
Openalex Percentile: Top 81%
Protein Degradation and Inhibitors
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A cytokine receptor–targeting chimera toolbox for expanding extracellular targeted protein degradation — Brandon B. Holmes, Zi Yao, et al. · Proceedings of the National Academy of Sciences (2026) | TGRS Research Map | TGRS