Oxidative stress induces <i>E. coli</i> aryl polyene expression, sensitizing the bacterial stress response and modulating the redox environment of innate immune cells

Aryl polyenes (APEs) are specialized polyunsaturated outer membrane lipids that protect their producers from oxidative stress and contribute to biofilm formation. APEs are produced by an abundant biosynthetic gene cluster (BGC) family conserved across Gram-negative bacterial clades. The APE biosynthesis pathway involves 11 different enzymes and cumulates in the attachment of APEs to an anchor molecule in the Gram-negative outer membrane. Unlike most other small molecule BGCs, the APE BGC does not contain a dedicated regulatory gene that controls production of its metabolically costly compounds. Building from our prior observations of APEs role in acute oxidative stress protection, we here use a uropathogenic <i>Escherichia coli</i> (UPEC) strain to show that APE expression conveys a potential competitive advantage characterized by increased early-stage growth, sensitization of the bacterial oxidative stress response, and dampening of the redox stress of innate immune cells after <i>in vitro</i> infection. Our data indicate that APEs could act as a UPEC fitness factor, and in future work we aim to study their contribution to overall bacterial pathogenicity and survival, as well as how APEs could facilitate the transition from an oxygen poor environment such as the gut to the oxygen rich environment of the urinary tract.

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Publication Details

Journal
bioRxiv (Cold Spring Harbor Laboratory)
Published
2026-01-21
DOI
https://doi.org/10.64898/2026.01.21.700819
Primary Topic
Bacterial biofilms and quorum sensing
Type
article
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article

Oxidative stress induces E. coli aryl polyene expression, sensitizing the bacterial stress response and modulating the redox environment of innate immune cells

Isabel Johnston, Jan Claesen, Viharika Bobba, Rachel L. Markley et al.
bioRxiv (Cold Spring Harbor Laboratory)
Bacterial biofilms and quorum sensing
article

Oxidative stress induces E. coli aryl polyene expression, sensitizing the bacterial stress response and modulating the redox environment of innate immune cells

Isabel Johnston, Jan Claesen, Viharika Bobba, Rachel L. Markley, Brianna Matthew, Emma Dester, Kelsey Ouyang, Genevieve Mann, Srishti Ithychanda
article en

Abstract

Aryl polyenes (APEs) are specialized polyunsaturated outer membrane lipids that protect their producers from oxidative stress and contribute to biofilm formation. APEs are produced by an abundant biosynthetic gene cluster (BGC) family conserved across Gram-negative bacterial clades. The APE biosynthesis pathway involves 11 different enzymes and cumulates in the attachment of APEs to an anchor molecule in the Gram-negative outer membrane. Unlike most other small molecule BGCs, the APE BGC does not contain a dedicated regulatory gene that controls production of its metabolically costly compounds. Building from our prior observations of APEs role in acute oxidative stress protection, we here use a uropathogenic <i>Escherichia coli</i> (UPEC) strain to show that APE expression conveys a potential competitive advantage characterized by increased early-stage growth, sensitization of the bacterial oxidative stress response, and dampening of the redox stress of innate immune cells after <i>in vitro</i> infection. Our data indicate that APEs could act as a UPEC fitness factor, and in future work we aim to study their contribution to overall bacterial pathogenicity and survival, as well as how APEs could facilitate the transition from an oxygen poor environment such as the gut to the oxygen rich environment of the urinary tract.

bioRxiv (Cold Spring Harbor Laboratory)
Cleveland State University (US), Cleveland Clinic (US), Cleveland Clinic Lerner College of Medicine (US), Cleveland Research (United States) (US)
Cleveland Clinic, Cleveland Clinic Foundation, National Institutes of Health
No poverty
Openalex Percentile: Top 81%
Bacterial biofilms and quorum sensing
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